Gene HS_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0875 
SymbolrplT 
ID4240367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp954900 
End bp955253 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content40% 
IMG OID638104430 
Product50S ribosomal protein L20 
Protein accessionYP_719085 
Protein GI113461018 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000028916 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTG TTAAACGTGG TGTTATTGCA AGAGCACGTC ATAAGAAAGT TCTTAAGGCA 
GCTAAAGGTT ATTATGGTGC ACGTTCACGT GTTTATCGTG TTGCATTCCA AGCAGTAATT
AAAGCTGGTC AATATGCTTA CCGTGACCGC CGTCAACGTA AACGTCAATT CCGTCAGCTA
TGGATTGCTC GTATCAATGC GGCTACTCGT CAAAACGGTT TATCGTATAG CAAATTTATC
AACGGTTTGA AAAAAGCATC TGTTGAGATC GATCGTAAGA TTTTGGCTGA TATTGCTGTG
TTTGATAAAG TTGCTTTTAC AGCATTAGTT GAGAAAGCAA AATCTGCACT TTAA
 
Protein sequence
MARVKRGVIA RARHKKVLKA AKGYYGARSR VYRVAFQAVI KAGQYAYRDR RQRKRQFRQL 
WIARINAATR QNGLSYSKFI NGLKKASVEI DRKILADIAV FDKVAFTALV EKAKSAL