Gene HS_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0849 
Symbol 
ID4240341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp927234 
End bp927998 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content34% 
IMG OID638104404 
ProductABC-type multidrug transport system, permease component 
Protein accessionYP_719059 
Protein GI113460992 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.227676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCTT GGATTGCGTT TAAAACAATT TTAACTAAAG AAATTCGTCG TTTTACTCGT 
ATTTGGGTAC AAACTTTAGT CCCTCCGGTC ATTACAATGA CACTTTATTT TATTATTTTT
GGTCATTTGA TTGGATCAAG AATTGGAGAA ATGAACGGCT TTAGCTACAT GCAGTTTATT
GTACCGGGAT TAATCATGAT GTCTGCGTTG ACTAATTCTT TTGCTAATGT GGCGTCTTCA
TTTTACAGTA CCAAATTTGC TAAAAATATA GAAGAATTAC TCATTTCACC TACTTCTTCT
CATATTATTA TTTTAGGATA TATGGCTGGT GGTATAGCCA GAGGTTTGTG CGTTGGTATT
TTAGTAACAA TCGTTGCTAT GTTTTTTGTG GAAATGACTG TCTATTCATG GCTAATTATT
GTGTTGACAC TTTTAATGAC AACAGCAACC TTTGCTTTAG GTGGTTTAAT TAATGCTGTT
TTTGCCCGCT CTTTTGATGA TATTAGTATT ATTCCAACTT TCGTTTTAAC GCCTTTAACT
TATCTTGGCG GTGTTTTCTA TTCTATTTCT TTGTTACCCG CTTTTTGGCA AAACATATCT
AAACTGAATC CTATTGTTTA TATGATTAAT GGGTTTAGAT ATGGTTTTTT GGGGGTTAGT
GACGTTGGAA TTCATTATAC TTTCACTGTT CTGACATTAT TTATTACCGC ACTTTATGGC
TTGGCATACT ATCTAATTAG TCGTGGGGTA GGGTTAAGAA ATTAG
 
Protein sequence
MLAWIAFKTI LTKEIRRFTR IWVQTLVPPV ITMTLYFIIF GHLIGSRIGE MNGFSYMQFI 
VPGLIMMSAL TNSFANVASS FYSTKFAKNI EELLISPTSS HIIILGYMAG GIARGLCVGI
LVTIVAMFFV EMTVYSWLII VLTLLMTTAT FALGGLINAV FARSFDDISI IPTFVLTPLT
YLGGVFYSIS LLPAFWQNIS KLNPIVYMIN GFRYGFLGVS DVGIHYTFTV LTLFITALYG
LAYYLISRGV GLRN