| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0841 |
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| Symbol | sohB |
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| ID | 4240333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 917847 |
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| End bp | 918890 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638104396 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_719051 |
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| Protein GI | 113460984 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0227554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGGTT ATGGCTTGTT TATTTTAGAA ATACTCACAA TTTTATTAAT TGTTGCAGGG
ATAGTGATGA TGATTATGAC ACTGAAAGAA CGTAAATCAC ATCAAGTCGG AGAGTTGGTT
ATTACAGATT TATCACGAGA ATATGAAAAT AACAGTAAAA AATTGCGTGA TTTTTACCTG
AGTGACGATG CGTTAAAACA ACGTGAAAAA GAGCAGAAAA AAGCCGATAA ACTTAAAGCA
AAAGAAGAAA AAGCCCAACG TAAAAAAGGG GAAACGTTAG CAGAAAAAAG AAAACCACAC
CTTTTTGTAT TGCATTTTAA AGGTGATATT TCTGCTTCAG AAACCACCGC ACTTCGAGAA
GAAATTAGTG CGATTATTGC GGTTGCAAAA GAAGATGACG AGGTTTTATT ACGCTTAGAA
AGTCCCGGTG GAGTTGTGCA TGGCTATGGA TTGGCTGCTT CTCAATTAGC TCGTTTAAAA
CAACGCAATA TTAAGCTAAC TGTAGCAGTG GACAAAGTTG CTGCAAGCGG AGGGTATATG
ATGGCTTGTG TTGCAGATAA AATTATTTCT GCTCCTTTTG CCATCATTGG ATCTATTGGT
GTTGTTGCTC AAATTCCCAA TATTCATCGT TTATTAAAAA AACATGATAT AGACGTTGAT
GTAATGACTG CTGGTGAATA TAAACGCACA ATGACCATTT TGGGTGAAAA TACAGAAAAA
GGAAAAGCAA AATTTCAACA AGATCTAGAA GACACTCATT TATTGTTTAA ACAATTCGTT
ACACAAAACA GACCGCACTT GGATATTGAT AAAATTGCAA CAGGTGAACA TTGGTTCGGC
AAACAAGCAT TAGCGTTACA TTTAGTTGAT GAAATTGCGA CGAGTGATGA TTTATTGTTA
CAAGCAATCA AAGGTAAAAC AGTGCTTTCG GTAAAATATA TGATGAAAAA ATCACTCATT
CAAAAATTAG GCAAACAAGC AGAAGAAAGT GCTAATAATG TGTTGTTACG ATTGCTGAAA
CGTGATGAGA GTACTTTGAT ATAA
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| Protein sequence | MIGYGLFILE ILTILLIVAG IVMMIMTLKE RKSHQVGELV ITDLSREYEN NSKKLRDFYL
SDDALKQREK EQKKADKLKA KEEKAQRKKG ETLAEKRKPH LFVLHFKGDI SASETTALRE
EISAIIAVAK EDDEVLLRLE SPGGVVHGYG LAASQLARLK QRNIKLTVAV DKVAASGGYM
MACVADKIIS APFAIIGSIG VVAQIPNIHR LLKKHDIDVD VMTAGEYKRT MTILGENTEK
GKAKFQQDLE DTHLLFKQFV TQNRPHLDID KIATGEHWFG KQALALHLVD EIATSDDLLL
QAIKGKTVLS VKYMMKKSLI QKLGKQAEES ANNVLLRLLK RDESTLI
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