| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0834 |
|---|
| Symbol | |
|---|
| ID | 4240326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 911255 |
|---|
| End bp | 911884 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638104389 |
|---|
| Product | lysine exporter protein |
|---|
| Protein accession | YP_719044 |
|---|
| Protein GI | 113460977 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0107637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAATT TATTATTGGT TAATTTATTC GGGTTACTTA CCCCGGGACC TGATTTTTTT
TACATAAGTC GTTTAGCAGC TAGTCATTCT AAGAGAAATG CCATTTGTGC TGCGTTTGGT
ATTAGCTTGG GTTGTTTAGT TTGGTCAACT TCAGCAATTC TTGGACTGGC TGTTTTATTG
ACATCTTACC CAAGTTTGCA AGGCATTATT ATGATGTTAG GTGGCGGATA TTTGGCTTAC
CTTGGTGTAT TAATGGTGAA AAGTCATAAC AATATTGTCT TTGATAATCG TGAACAAGCA
GAAAATTTAA GAAACAGTAT GGGTAAAGAA ATCTTAAAAG GATTATTGAT TAATTTATCT
AATGCAAAGG CTATTATCTT CTTTAGTAGC GTGATGTCTT TTGTATTGGT TGATTTAACT
GAAACATGGC GGATTATTAC CGCACTTATT TTATTAACTC TTGAAGTATT TTTGTATTTT
TCTTTTATTG CACTTATTTT TTCTCGTAAA ACCGTAAAAA AATTTTATAG CCAATATAGC
CATTATATTG ATAACTTTGC AGGGATCTTT TTTCTTTGTT TTGGTGGATA TTTAATTTAT
AGCGGTTTTT CCTTAGGATT TGGCAATTGA
|
|---|
| Protein sequence | MLNLLLVNLF GLLTPGPDFF YISRLAASHS KRNAICAAFG ISLGCLVWST SAILGLAVLL
TSYPSLQGII MMLGGGYLAY LGVLMVKSHN NIVFDNREQA ENLRNSMGKE ILKGLLINLS
NAKAIIFFSS VMSFVLVDLT ETWRIITALI LLTLEVFLYF SFIALIFSRK TVKKFYSQYS
HYIDNFAGIF FLCFGGYLIY SGFSLGFGN
|
|---|
| |