| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0816 |
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| Symbol | htrA |
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| ID | 4240307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 890297 |
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| End bp | 891685 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638104370 |
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| Product | periplasmic serine protease |
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| Protein accession | YP_719026 |
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| Protein GI | 113460959 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0094905 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAT CTAGCTTTGT TTTAACCGGT ATTGCTTTAG GGTTAAGTGT TCTAACAACA
TCAATTAATG TTCAAGCAAG TTTGCCTATG GCAGTTGATG GACAATCTCT TCCAAGCTTA
GCACCAATGT TACAAAAAGT TTTACCCGCA GTAGTTTCTA TTGCGGTAGA AGGGAAACAA
AAAAATGATT TTTCTTTCAA TAATGAAATT CCCGAAGAGT TTCGCCGTTT TTTTGGTGAC
AGCTTTGGTT TTGAAGGATT TAGCAGTCGT GCACCGCGTA GTTTTCGTGG TATTGGATCC
GGAGTGATTA TTGATGCAGA AAAAGGTTAT GTATTGACAA ATAATCACGT GATTGATCAG
GCTGATAAAA TCACGGTCAA ATTAGAAGAT GGGCGTGAAT TTAAGGCAAA GGTTCTTGGC
AAGGATGATA TGTCGGATAT TGCACTTATT CAATTAGAAA ATCCTAAAAA TCTGACCGCA
GTTAAGATCG CTGATTCTGA TAAATTAAGA GTCGGGGATT TTACAGTTGC TATCGGTAAT
CCATTCGGTT TGGGGCAAAC CGCAACATCG GGAATTGTTT CGGCATTAGG GCGTTCAACA
GGATTTGATA GCGGAGCTTA TGAGAACTAT ATTCAAACTG ATGCTGCCGT AAATAGAGGT
AATTCCGGAG GACCATTAGT AAATTTAAAT GGTGAGCTTA TAGGGATTAA TACTGCTATT
ATTTCTCCAA GTGGCGGAAA TGCGGGAATT GCATTTGCGA TTCCAAGTAA TATGGCAATC
AGTTTAGTTA AGCAAATTAT TGAATTTGGC GAAGTTCGTC GAGGATTACT CGGTATTAAA
GGAGGTGAAT TGAATGCCAA CTTAGCAAAA GAATTCAATA TTGATGTACA ACAAGGTGCG
TTTGTGAGTG AAGTATTGCC AAATTCAGCG GCAGAAAAAG CCGGACTTCA AGCGGGTGAT
GTGATTACGG CAATTGATGG ACAAAAACTG GCAAGTTTTG CGGAGTTGCG TGCAAAAATT
GCAACAAGTG GTGCCGGTAA AGAAATTAAA TTGACCTATT TACGTGACGG TAAATCGAAA
ACTGCGAAAG TGAAATTGCA ATCTGATGAT GGAGATACAA TTTCTGCAGT TGGCAACATT
TCTATATTAG AAGGTGCGGA ATTAAGTAAT TATAATCAAA AAGGCACAAA AGGCGTTGAA
ATTAAAGAAG TTAAATCAAG ATCTCTTGCT GCTCAATATG GTTTAGAAAA AGGCGATATT
ATTATTGGAG TGAACCGCCA TAAAGTAGAA AATTTATCTG ATTTACGTAA AATTTTAGGC
AAAAAACCTT CAGCTATTGC CTTGAACATT TTACGAGATA ACAGTCGTTT TTATTTATTA
ATCCAATAA
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| Protein sequence | MKKSSFVLTG IALGLSVLTT SINVQASLPM AVDGQSLPSL APMLQKVLPA VVSIAVEGKQ
KNDFSFNNEI PEEFRRFFGD SFGFEGFSSR APRSFRGIGS GVIIDAEKGY VLTNNHVIDQ
ADKITVKLED GREFKAKVLG KDDMSDIALI QLENPKNLTA VKIADSDKLR VGDFTVAIGN
PFGLGQTATS GIVSALGRST GFDSGAYENY IQTDAAVNRG NSGGPLVNLN GELIGINTAI
ISPSGGNAGI AFAIPSNMAI SLVKQIIEFG EVRRGLLGIK GGELNANLAK EFNIDVQQGA
FVSEVLPNSA AEKAGLQAGD VITAIDGQKL ASFAELRAKI ATSGAGKEIK LTYLRDGKSK
TAKVKLQSDD GDTISAVGNI SILEGAELSN YNQKGTKGVE IKEVKSRSLA AQYGLEKGDI
IIGVNRHKVE NLSDLRKILG KKPSAIALNI LRDNSRFYLL IQ
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