Gene HS_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0769 
SymbolrbsC 
ID4240260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp824779 
End bp825807 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content34% 
IMG OID638104323 
Productribose transport system permease 
Protein accessionYP_718979 
Protein GI113460912 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00219185 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAACT TAAAATTAAT TTTTTCAAAA TTAGGAATTG GTATTGCATT AATTGTAATG 
ATTATTGGAA TGTCATTTGC ATCTGATGCA TTTTTATCAG CTCATAATAT TCTAAATATT
TTATTACAAG TTTCAGTTAT ATGTATTATT GCTGTAGGTA TGACTTATGT TATTTTAACT
GGAGGGATAG ATCTTTCTGT AGGTTCTATC GTTGCACTAA GTGCCGTATG CTTAGGATTA
TTTACTCATC TAGGTCTTAA GTGGTTAGGC GATGAAGTAT CAGATTTTGC CGTATTAGCG
GTGGTTTTAA TTGCTATATT AGGGAGCGTT TTAGTTGGTG CACTATGTGG ATATATAAAT
GGAATTATCA TTGTGTATGG TAAAGTTACT TCATTTATTG CAACACTTGG TATGATGGGG
ATTGCTAGGG GATTGGCACT AACGATATCA GATGGAAAAA CAATTTATAA CTTTCCTGAT
GCTCTGCGTT TTTTTGGTAA TGGAAGAATA CCTATTTCAG ATTCGTTTTC TATACCTATC
CCAGTAATCA TTGCTATTTT GGTTGTGTTG GTTAGTTTTT ATGTGCTAAC GCAAACGATT
TTTGGTCGCC AAATTTATGC TTTAGGTGGA AATCGAGAGG CGGTTCGTTT GTCTGGTGTA
AATGTTGAGA AATTAGAAGT CAAAACATAT GTAATTAATG GTGCATTGGC TGCAGTAGGT
GCGGTAATTT TAGTAGGACG TTTGAATGCG GCACAACCTA TCGCAGGTAC AGGTTATGAA
TTAGATGCTA TTGCTGCAAC TGTTATTGGT GGTACAAGTT TGATGGGTGG TTTTGGTTCA
GTTATTGGAA CTTCAATCGG TGCATTAATT ATGGGAGTAC TGCAAAATGG TCTGACTTTA
TTAGATGTGA CGTCTTATTT ACAACGCCTA ATTATTGGTG TTGTTATTAT TCTAGCAGTA
TTTTTTGACC AATTACGGCG TGGTAAAGTT TCAATAGGAC AATTAAAGCG TATTTTCTTT
AGAGAATAA
 
Protein sequence
MDNLKLIFSK LGIGIALIVM IIGMSFASDA FLSAHNILNI LLQVSVICII AVGMTYVILT 
GGIDLSVGSI VALSAVCLGL FTHLGLKWLG DEVSDFAVLA VVLIAILGSV LVGALCGYIN
GIIIVYGKVT SFIATLGMMG IARGLALTIS DGKTIYNFPD ALRFFGNGRI PISDSFSIPI
PVIIAILVVL VSFYVLTQTI FGRQIYALGG NREAVRLSGV NVEKLEVKTY VINGALAAVG
AVILVGRLNA AQPIAGTGYE LDAIAATVIG GTSLMGGFGS VIGTSIGALI MGVLQNGLTL
LDVTSYLQRL IIGVVIILAV FFDQLRRGKV SIGQLKRIFF RE