| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0743 |
|---|
| Symbol | rluB |
|---|
| ID | 4240234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 798231 |
|---|
| End bp | 799208 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638104297 |
|---|
| Product | ribosomal large subunit pseudouridine synthase B |
|---|
| Protein accession | YP_718953 |
|---|
| Protein GI | 113460886 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.405122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGATA ATACGAAGCG ATTTGCAAAC AAAGAAACAG TATCTGAACG TAAAAGTGCG
GTAAAAAACA CTCAAATTTC TCCAACATCA ACAAAATCAA CTCATGCTGT CAATCAGCAA
AAAGTCGAAG GGGAAAGACT ACAGAAAGTG TTGGCTAGAG CAGGACAAGG GTCACGTCGG
ACAATTGAAG CAATGATTAG TGCCAATCGT ATTAGTATTG ACGGAAAAAT GGCGACTTTA
GGTGATCGTG TTGATATACA TTCCGGCGTA AAAATCAGAA TTGATGGACA TATTGTCAAT
TTAACTCAAG CACAAAAAGA AGTATGTCGA GTTTTACTCT ATTACAAACC GGAAGGAGAA
CTTTGCACTC GACATGATCC AGAAGGAAGA GCAACGGTTT TTGATCGTTT ACCCCGTTTA
AACGGATCTC GTTGGATTGC GGTTGGTCGT TTGGATATTA ATACATCCGG ACTACTTTTA
TTTACGACTG ATGGTGAGTT AGCTAATCGT TTAATGCACC CACGACACGA AGTTGAACGA
GAATATGCCG TGCGTGTTTT TGGGGAAGTA GATGATGCAA TGATTGCTCG TTTACGTAAA
GGCGTTCAAT TAGAAGATGG GCCTGCTAAC TTTACCAGTA TTAAAGCAAC AGGCGGGCAA
GGAATGAACC AATGGTTCGA TGTCACCTTG ATAGAGGGGC GAAACCGAGA AGTTCGTCGA
TTGTGGGAAT CACAAGGCAT TCAAGTAAGT CGTTTAATTC GTATTCGCTA CGGTAATATT
AAATTAACGA AATCGTTACC ACGTGGCGGT TGGGAAGAAA TGGATCTAAC CAATATTAAT
TATTTACGGA AACTTGTTGG GCTACCGCCT GAAACAGATA GCAAAATTGA TACTAAAAAA
CCTCGTCGTA TAAAAACGGG ACAAATTCGT AAAGCTGTTA AACGCTATGC TGAATTGAAT
AAACGTTATA AGAAATAA
|
|---|
| Protein sequence | MRDNTKRFAN KETVSERKSA VKNTQISPTS TKSTHAVNQQ KVEGERLQKV LARAGQGSRR
TIEAMISANR ISIDGKMATL GDRVDIHSGV KIRIDGHIVN LTQAQKEVCR VLLYYKPEGE
LCTRHDPEGR ATVFDRLPRL NGSRWIAVGR LDINTSGLLL FTTDGELANR LMHPRHEVER
EYAVRVFGEV DDAMIARLRK GVQLEDGPAN FTSIKATGGQ GMNQWFDVTL IEGRNREVRR
LWESQGIQVS RLIRIRYGNI KLTKSLPRGG WEEMDLTNIN YLRKLVGLPP ETDSKIDTKK
PRRIKTGQIR KAVKRYAELN KRYKK
|
|---|
| |