Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0736 |
Symbol | rnd |
ID | 4240227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 791850 |
End bp | 792995 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104290 |
Product | ribonuclease D |
Protein accession | YP_718946 |
Protein GI | 113460879 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0989413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTTT TAATAAAAGA AATCCAAAAT TCACCGCAGT TTCAATTGAT TACTACAAAT GATCGTTTAT ATGAGATTTG CCAACAGGCA CAACAAAAAA CGGTGATTGC TTTGGATACT GAGTTTGTTC GCACCAAAAG TTTTTATCCC AAACTAGGAT TGATTCAACT TTATGACGGT GAGCAAGTGA GCTTAATAGA TCCTTTTGAG TTGAGTGATT TTTCTCCTTT TATTCAACTT TTAGCCAATC AAAAGGTCAC AAAAGTATTG CACGCTTGCA GTGAGGATCT GGAAGTTTTT CAACATTATT TTCAGCAGTT GCCAACGCCA ATGTTAGATA CTCAAATTAT GGCGGCATTT TTGCAACATG GCAATTCCAT TGGTTTAGCT ATATTGCTAA AACATTATTT CAAGCTGGAA ATAGATAAAG GGATTTCTCG CACTAATTGG CTTGCTCGCC CTTTGTCTGA CGTACAATTG CACTATGCTG CTGCCGATGT ATGGTATTTA TTGCCATTAT ATCAACGTAT GCAACAAAAA TTAGCTCAAA CCTCTTGGCA AAGTGCGGTG CAAAATGATT GTGAAAATTT GTTGAACAAA TATACTCAGA TAAAAGATAG TGACAATGCT TATTTTTCTA TATCCGGAGC GTGGAAATTA AACTCTCAGG AATTAATGCG TTTAAAGCTG TTAGCAAAAT GGAGACAAGA AGAAGCGATA AAGCGTAATC TTGCATTAAA TTTTGTTGTT CGTGCAGAGC ATTTGATTTT ATTAGCACAA CATAATCCAA AATATACTTC ACAGCTGTTA TCCATTGGTT TATCTCCGCT GGAAGTGCGT ATTCATGGTA AAAAAATATT ACAACTCTTA GAGAAAGCAA ACAAAGCACC GGCGTATGAC TATCCACCAC CAATTTTGCG AGTCACTGAT GATCATCGTT ATCGTGTAGC AATTAAATTG TTACAAGCAA CGTTACGGGA AATCACTCCG GCAGATTTAC CGACTGAAGT TTTGTCAACT AAGCGTATGT TAGATCAGCT GATAAAGTGG CATTGGATTA AACAAGACAA TCCTCATGAT TTACCTGATT TGCTTTGCGG ATGGCGTAGG GAGTTTGGAT TATTGTTATT AAAGGCTTTG CATTAA
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Protein sequence | MSVLIKEIQN SPQFQLITTN DRLYEICQQA QQKTVIALDT EFVRTKSFYP KLGLIQLYDG EQVSLIDPFE LSDFSPFIQL LANQKVTKVL HACSEDLEVF QHYFQQLPTP MLDTQIMAAF LQHGNSIGLA ILLKHYFKLE IDKGISRTNW LARPLSDVQL HYAAADVWYL LPLYQRMQQK LAQTSWQSAV QNDCENLLNK YTQIKDSDNA YFSISGAWKL NSQELMRLKL LAKWRQEEAI KRNLALNFVV RAEHLILLAQ HNPKYTSQLL SIGLSPLEVR IHGKKILQLL EKANKAPAYD YPPPILRVTD DHRYRVAIKL LQATLREITP ADLPTEVLST KRMLDQLIKW HWIKQDNPHD LPDLLCGWRR EFGLLLLKAL H
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