Gene HS_0725 details

Gene Information

• Locus tag: HS_0725
• Symbol: ftsH
• ID: 4240216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 778524
• End bp: 780362
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638104279
• Product: FtsH peptidase
• Protein accession: YP_718935
• Protein GI: 113460868
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACGATA TGGTGAAAAA TATAGTCCTT TGGATCGTAG TCGCTGTTGT CATGATGACA 
GCCTATCAGA GTTTTAGCGG AAACTCATCA AATAACGCAA TTGATTACAC CACTTTTATT 
AGCGATGTAG AAAATAACCA AGTTTCAGCC ACTAAATTTA ATGAGGTCGG TGAAATTTTT 
GTAACTAAAA AAGATGGTTC AAAATATACG ACAGTTCTTC CTACACCGTT AGAAGATCGT 
AAGTTATTAG ATGATCTGAT TAAATCAAAG GTGAAAATTG ATGGTGCATT GCCTGAGCAA 
CGGGGATTTT TATCGCAAAT TTTAATTTCT TGGTTTCCAA TGATCTTATT AATTGGCGTT 
TGGTTCTTTT TTATGCGTCA AATGCAAGGC GGTGGCGGCA AAGCAATGAG TTTTGGTAAA 
AGTCGTGCCA AAATGCTAAC GAAAGAACAA ATTAAAACTA CTTTTGCCGA TGTTGCAGGC 
TGTGATGAGG CTAAAGAAGA AGTCGGTGAA ATCGTTGATT TCTTACGTGA TCCAAGCAAA 
TTCCAAAAGT TAGGTGGTAA AATTCCAAAA GGAATTTTAA TGGTTGGACC TCCCGGTACT 
GGTAAAACCT TATTAGCAAA AGCTATCGCT GGTGAAGCAC AAGTACCATT TTTTACGATT 
TCAGGATCTG ATTTCGTAGA AATGTTTGTT GGTGTAGGTG CTTCCCGTGT CCGTGATATG 
TTTGAACAAG CGAAGAAAAA TGCACCTTGT TTGATTTTTA TTGATGAGAT TGATGCGGTC 
GGTCGTCAAC GTGGTGCAGG TCTTGGAGGA GGGCATGATG AACGTGAACA AACCTTGAAC 
CAAATGCTTG TTGAGATGGA TGGCTTTGAA GGCAACGAAG GTGTGATAGT GATTGCGGCA 
ACGAATCGCC CTGACGTACT TGATCCTGCG TTGACTCGTC CAGGACGATT TGACCGTCAA 
GTCGTTGTTG GATTGCCGGA TGTACGTGGT CGTGAGCATA TTTTAAAAGT TCATATGCGA 
AAAGTGCCTG TGGCGGATGA TGTTGATGCA ATGACATTAG CTCGTGGTAC ACCGGGATAT 
TCAGGTGCGG ATTTAGCTAA TCTTGTGAAT GAAGCCGCAC TATTTGCCGC ACGTACTAAT 
AAGAAATTGG TTACCATGTT AGAGTTTGAA AAAGCAAAAG ATAAAATTAA CATGGGACCA 
GAACGCCGTT CTATGATTAT GACCGATAAA GTGAAAGAGA GTACTGCTTA CCATGAAGCA 
GGGCATGCAA TCGTTGGTTA CTTAGTACCT GAACATGATC CCGTACATAA AGTGACTATT 
ATTCCTCGTG GACGTGCTTT AGGCGTAACT TTCTTTTTAC CGGAAGGTGA TCAAGTTAGT 
ATTAGCCAGA AACAATTGGA AAGTAAACTT TCTACTTTAT ATGCGGGTCG TTTAGCTGAG 
GAACTTATTT ACGGTGAAGA AAATATCTCA ACAGGTGCTT CTAATGACAT CAAAGTAGCA 
ACTAATATTG CTCGTAATAT GGTAACGCAA TGGGGTTTTT CAGATAAATT GGGACCGATT 
TTATATTCAG AAGATGAAGG CGAAGTGTTT CTAGGTCGGT CAATGGCGAA AGCTAAACAT 
ATGTCTGATG AAACCGCACA TACGATAGAT GAAGAAGTAA GATCAATAGT GAATCGTAAT 
TATCAAAGAG CAAGACAAAT TCTGACTGAT AATATGGATA TTTTACATGC AATGAAAGAT 
GCGTTAGTAA AATATGAAAC TATTGAAGAA GAGCAAATTA AGCAATTAAT GAATAGAGAA 
CCGGTTGTTG CTCCTCCAGG TTGGACTAAT AATGAGTAA 

 

Protein sequence

MNDMVKNIVL WIVVAVVMMT AYQSFSGNSS NNAIDYTTFI SDVENNQVSA TKFNEVGEIF 
VTKKDGSKYT TVLPTPLEDR KLLDDLIKSK VKIDGALPEQ RGFLSQILIS WFPMILLIGV 
WFFFMRQMQG GGGKAMSFGK SRAKMLTKEQ IKTTFADVAG CDEAKEEVGE IVDFLRDPSK 
FQKLGGKIPK GILMVGPPGT GKTLLAKAIA GEAQVPFFTI SGSDFVEMFV GVGASRVRDM 
FEQAKKNAPC LIFIDEIDAV GRQRGAGLGG GHDEREQTLN QMLVEMDGFE GNEGVIVIAA 
TNRPDVLDPA LTRPGRFDRQ VVVGLPDVRG REHILKVHMR KVPVADDVDA MTLARGTPGY 
SGADLANLVN EAALFAARTN KKLVTMLEFE KAKDKINMGP ERRSMIMTDK VKESTAYHEA 
GHAIVGYLVP EHDPVHKVTI IPRGRALGVT FFLPEGDQVS ISQKQLESKL STLYAGRLAE 
ELIYGEENIS TGASNDIKVA TNIARNMVTQ WGFSDKLGPI LYSEDEGEVF LGRSMAKAKH 
MSDETAHTID EEVRSIVNRN YQRARQILTD NMDILHAMKD ALVKYETIEE EQIKQLMNRE 
PVVAPPGWTN NE