Gene HS_0719 details

Gene Information

• Locus tag: HS_0719
• Symbol: rep
• ID: 4240208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 770124
• End bp: 772136
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 638104272
• Product: ATP-dependent DNA helicase Rep
• Protein accession: YP_718931
• Protein GI: 113460864
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases
• TIGRFAM ID: [TIGR01074] ATP-dependent DNA helicase Rep

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCA ATGCTCAACA ACAACAAGCC GTAGAATACA CACAAGGTCC TTGCTTAGTT 
TTAGCCGGTG CCGGCTCCGG TAAAACTCGG GTTATTATTA ATAAAATTGC TTATTTAATT 
GAACATTGTG GCTACTTACC AAAACAAATT GCTGCTGTTA CATTTACTAA CAAAGCGGCT 
AGAGAAATGA AAGATCGTGT TGCACATTCA ATCGGTAAAG AAAAAACAAG AGGTCTGCTT 
GTTTCAACTT TTCATACTTT AGGTTTTGAC ATTATTAAAC AAGAATACAA ACATCTCGGT 
TTTAAAGCCA ATATGACCTT ATTTGATGAA TATGATCAAA TGGCATTATT AAAAGAGATT 
ACGGCAGATC TATTAAAAGA AGATAAGGAG CTATTGCAAG AGACAGTTTC GGCGATCTCT 
CGTTGGAAAA ATGATCTTAT TCTTCCTCAA CAAGCGTTCA CTCAAGTAAG AGACAGTAAG 
CAACAAACTT TTGCCAAGTG TTATGAGCGT TACAATAATC AAATTCGTGC CTACAATGCA 
TTAGATTTTG ACGATTTAAT TATGTTGCCC ACTTTATTAT TTCTCCAAAA TCAAGAAGTG 
CGGTCTAAAT GGCAAGAAAA AATTCGTTAT TTATTAGTTG ATGAATATCA AGACACTAAT 
ACAAGTCAAT ATGAATTGGT GAAGTTATTA GTCGGTCAAC ATACTCACTT TACTGTAGTT 
GGTGATGATG ATCAGTCTAT TTACTCATGG CGAGGTGCAC AACCGCAAAA TATGGCTCGG 
TTAAAAAATG ATTTTCCACA ATTACAAGTT ATTAAACTGG AACAAAATTA TCGCTCTAAC 
CAGCGTATTT TGCATTGTGC TAACATCTTA ATTGCAAATA ATGATCATGT ATTTGAAAAA 
CGTTTATTTT CTACTTTAGA GCAAGGTGAA AAACTACAAG TTCTGGAGGC AAAAAATGAG 
GAGCATGAAG CGGAGCTGGT CGTTGGAGAA TTAATCACCC ATCGTTTTAT GTATAAAACC 
AATTATCGTG ATTATGCAAT ATTGTATAGA GGAAATCATC AATCAAGACT ATTCGAGAAA 
GTCTTAATGC AAAATCGAAT TCCCTATAAA ATCTCAGGGG GAACTTCTTT TTTCTCTCGA 
GCAGAGATTA AAGATATGAT GGCTTATTTA CGTGTACTGA TAAATCAAGA TGATGATGCG 
GCTTTATTAC GTATTATTAA TACACCCAAA CGAGAAATAG GCTCCGTTAC TTTGGCAAAA 
GTTGGAAAAC TTGCTCAAGA AAAACATATT AGCCTTTTTG ACGCTATTTT TGATTTTGAC 
TTAATTCACC AACTCAGTCC CAAATCCTAT AATGCCTTAC AAGGCTTTGC ATATTGGATT 
GTCGAACTCA ATGATGAAAT TCAACGCTCA GAGCCTGAGC AAGCAATCAA ACGAATGTTG 
GCACAGTTAC ATTATGAAGA ATATTTATAT GAACATGCCA ACAACCCTAA AATTGCAGAA 
ATGCAAAGCA AAAATGTAGC CACGTTATTT GAATGGGTTG CAGTTATGCT AAAAGGAGAT 
GAGTTCAATG AACCTATGTC TCTTAGTCAG GTTGTCAGCC ATCTGACGCT ACGAGATATG 
TTGGAACGCA ATGAAACTGA TGAAGAAAGT AATCAAGTGC AATTGATGAC ATTACATGCC 
TCGAAAGGTT TGGAGTTTCC ACACGTTTTT TTAATCGGAA TGGAAGAAAA TATTCTGCCA 
CATCAAACCA GTATTGATGA GGATAATGTT GAAGAAGAAC GGCGTTTAGC TTATGTAGGT 
ATTACTAGAG CACAAAAATC TCTCACATTT TCTTTATGCA AAGAGCGGAA ACAATTTGGT 
GAGATTTTCA AGCCTGAGCC CAGTCGTTTT TTATCTGAGT TACCCCAAGA TGATCTTCAA 
TGGGAGAGAA ATGAAACACA TGCAACAGAA CAAGAAAAAA AAGAAATGAA AAATGCCGGA 
TTTGCCAGTT TAAGGGCGAT ATTAAATCAA TAA 

 

Protein sequence

MKLNAQQQQA VEYTQGPCLV LAGAGSGKTR VIINKIAYLI EHCGYLPKQI AAVTFTNKAA 
REMKDRVAHS IGKEKTRGLL VSTFHTLGFD IIKQEYKHLG FKANMTLFDE YDQMALLKEI 
TADLLKEDKE LLQETVSAIS RWKNDLILPQ QAFTQVRDSK QQTFAKCYER YNNQIRAYNA 
LDFDDLIMLP TLLFLQNQEV RSKWQEKIRY LLVDEYQDTN TSQYELVKLL VGQHTHFTVV 
GDDDQSIYSW RGAQPQNMAR LKNDFPQLQV IKLEQNYRSN QRILHCANIL IANNDHVFEK 
RLFSTLEQGE KLQVLEAKNE EHEAELVVGE LITHRFMYKT NYRDYAILYR GNHQSRLFEK 
VLMQNRIPYK ISGGTSFFSR AEIKDMMAYL RVLINQDDDA ALLRIINTPK REIGSVTLAK 
VGKLAQEKHI SLFDAIFDFD LIHQLSPKSY NALQGFAYWI VELNDEIQRS EPEQAIKRML 
AQLHYEEYLY EHANNPKIAE MQSKNVATLF EWVAVMLKGD EFNEPMSLSQ VVSHLTLRDM 
LERNETDEES NQVQLMTLHA SKGLEFPHVF LIGMEENILP HQTSIDEDNV EEERRLAYVG 
ITRAQKSLTF SLCKERKQFG EIFKPEPSRF LSELPQDDLQ WERNETHATE QEKKEMKNAG 
FASLRAILNQ