| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0714 |
|---|
| Symbol | rluC |
|---|
| ID | 4240202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 760954 |
|---|
| End bp | 761934 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638104266 |
|---|
| Product | 23S rRNA pseudouridylate synthase C |
|---|
| Protein accession | YP_718926 |
|---|
| Protein GI | 113460859 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACATA TTAATGAAAA AATCATAAAC CAAAGTGTAA AAATACTAAC AATCAATGAA
GATGAAAGTG GACAGCGTAT TGATAATTTT TTGTTGGCAA AATTGAAAAG CGTACCCAAA
AGTTTGATTT ATCGAATTTT GCGTAAAGGT GAAGTAAGGG TCAACAAAGG CAGAATTAAA
CCTGAGTATA AACTACAAAA TGGCGATATT GTTAGAATTC CACCGGTTCG TATTGCGGAA
AAAGAACATA CCCCTATTTC AAAAAAATTG AATAAAGTCG CACAGTTGGA ACAACAAATT
ATCTTTGAAG ACAATTATTT ATTAGTGTTA AACAAACCTT CAGGCCTTGC AGTACATGGC
GGTAGCGGAT TAAATTTTGG AGCAATAGAA GCATTACGTA CATTACGCCC TGAAGCACGT
TTTTTAGAAT TAGTACACCG CTTGGACAGA GATACTTCAG GTATATTGCT TATTGCAAAG
AAACGATCTG CTTTACGTAG CCTACATGAG CAACTACGTG AAAAAACCAT ACAAAAAGAA
TATCTGGCAT TAGTTCGTGG TCATTGGCAA TCTCATTGTA AGATGATACA AGCACCATTG
TTGAAAAATG AACTTACGAG TGGCGAACGA ATTGTAAAAG TAAATGAACA AGGTAAGCCT
TCAGAAACAA AGTTTAGCGT TGAAGAACGT TATAATAATG CTACTTTAGT TAAGGCATCT
CCTATTACAG GAAGAACTCA TCAAATTCGT GTACATACCC AATACGCAGG TCATCCTATC
GCACTTGATG ATAAATATGG TGATAAAAAT TTTGATCAAC AAATGACCGC ACTTGGCTTA
AACCGTTTAT TCTTGCATGC TTTTGCTATT TGTTTTGAAC ATCCCAAAAC AGGGGAAAGG
CTACGCCTAG TTGCTCCATT AGATCTCGCA ATGAAAAATA TTTTACAAGT CTTACGAGAA
ATAAAAAATA AAACTCTTTG A
|
|---|
| Protein sequence | MTHINEKIIN QSVKILTINE DESGQRIDNF LLAKLKSVPK SLIYRILRKG EVRVNKGRIK
PEYKLQNGDI VRIPPVRIAE KEHTPISKKL NKVAQLEQQI IFEDNYLLVL NKPSGLAVHG
GSGLNFGAIE ALRTLRPEAR FLELVHRLDR DTSGILLIAK KRSALRSLHE QLREKTIQKE
YLALVRGHWQ SHCKMIQAPL LKNELTSGER IVKVNEQGKP SETKFSVEER YNNATLVKAS
PITGRTHQIR VHTQYAGHPI ALDDKYGDKN FDQQMTALGL NRLFLHAFAI CFEHPKTGER
LRLVAPLDLA MKNILQVLRE IKNKTL
|
|---|
| |