| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0664 |
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| Symbol | mnmC |
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| ID | 4240152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 711629 |
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| End bp | 713659 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638104216 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_718876 |
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| Protein GI | 113460809 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0436264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAG TTACGCCCGC CAAAATTTAC CTGAATCAAG AAAAAACACC GGTATCAGAA
CAATTTAATG ACGTTTATTT TTCCAACCAA GACGGTTTAG CAGAAAGCGA ATACGTATTT
CAGCAAGGTA ATCATTTATG GGAACGCTGG ATTGTCTATC AAGAAAAACA TTTTGTCATT
GCAGAAACAG GATTTGGTAC AGGTTTAAAT TTTCTTGCCG TAACAAGTTT ATTTCGCCAA
TTTCGTCAAC AATATCCTGA TTTTCCGCTT AAACGTTTAT TTTTTATTTC CTTTGAGAAA
TACCCTCTCC CCAAAGACCA ACTACAACAA ATTCATCGAC TTTACCCTCA ATTTTCCGCC
TTATCACAAC AACTATGTGA TTATTGTTTA GATGCAATAC AGGGGTGTCA ACGTTTTCAT
TTTGCTGAAA CAACATTGGA TTTATGGTTT GGCGATATTG CCGATAATTT ACCCCAACTG
GGTGATTATA TGCAAAATCG CATTGATGCT TGGTTTTTAG ACGGTTTTTC ACCAAGTAAA
AATCCACAGA TGTGGAATGA TAAACTGTAT CAACAGATAT TTTATTACAG CAAACCACAA
GGTACATTTG CTACATTTAC CGCAGCAAGT GCGGTCAGAA AAGGATTAAT TTCTGCCGGA
TTTGAAGTAC AAAAACGCAA AGGTTACGGC AAAAAGCGGG AATGTTTATG CGGCATCAAA
AATTCTACCC AACAACAAAA TGCAAAATTT CCTTGGTACT TAAATCAGCC TGCCTCATTA
CTTTCTGAAG ACATTGCCAT TATTGGAGGC GGAATCGCTT CACTTTTCAC CGCACTTTCA
CTATTAAAAA GAGGTGCAAA AGTTACTCTT TATTGCGAAG ATGAACAACT TGCCCTCAAT
GCCTCCGGTA ATAAACAAGG TGCATTTTAT CCTCAACTGA GCGATGACGA TGATCGCAAT
ATTCGCTTTT ATGTTCATGC CTTTTTCTAT GCTTTACAAC AATTGCAGTG GGCAATTAAA
CAAGGTATAG AATTTGAACA TGAATTTTGT GGTGTAGCAC TTTGTGCTTA CGATCACAAA
AGTGCGGTTA AATTGGCAAA AATTTCTTCT TATCAATGGT CAAAAAGCTT GTATCAGAAT
TTAAATAAAG AGCAGTTAAG TGAAAAAATA GGGCTTCCTT TAGATTGTGC AGGAGGTTTT
ATTCCGCAGG GAGCTTGGCT TGCTCCACGT CAATTTGTGC AAAATGCTTT TTCTTACTTA
CAACAACTTG GATTAGAGAT CAAAACCTCA CAAAAAATTA CCGCACTTGA CTACCGAAAT
TTACAATGGG TTTTAACCAA TGAACAAAAT GAAACCTTTA ATCATCAAGT TGTTGTACTC
GCCAATGGTT ATCAAATTAC AGATTTTGTG CAAACAGCTA AACTTCCTCT TTATCCCGTA
CGAGGTCAAG TCAGCCAAAT TCCGACCAGT GCAAATTTAC TGAAACTTAA ATCCGTACTT
TGTTACGATG GCTATTTAAC TCCGGCGGAT AAAATGAAAC AGAGTCATTG CCTTGGTGCA
AGTCATATTC GCAATAACAA AGATCGCCAT TTTAGCCATC AAGAACAACG GGAAAATCAG
CAAAAAATTC AACAAAATCT AGCTTCTACC GATACGGATA AAAATATGGA TTGGTTGCAG
GATATTGATA TATCAGCCAA TATAGCTAGA ATAGGTGTTC GTTGTTCAGT GCGTGATCGT
GTGCCGATTA TGGGGAATGT ACCTCATTTT GAGCAACAAT GTTTAGACTA CCGAAACATC
TTCAATTTAC GTCGTCGTAA ACAGCCTATT CCTGATGCAG CACAATGGAA AAATTTATAT
CTCATCGGTG CGTTAGGCTC AAGAGGGTTA ACTTCAGCCG CTTTATTAGG TGAAACCCTT
GCCTCTCTGA TTTATGCAGA ACCACTCCCT TTGAGCGAAG ATATTCTACA TAATCTCAGC
CCAAATCGCA GTTGGATACG TAAGTTATTA AAAGGAACTG AAATTAAATA A
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| Protein sequence | MFTVTPAKIY LNQEKTPVSE QFNDVYFSNQ DGLAESEYVF QQGNHLWERW IVYQEKHFVI
AETGFGTGLN FLAVTSLFRQ FRQQYPDFPL KRLFFISFEK YPLPKDQLQQ IHRLYPQFSA
LSQQLCDYCL DAIQGCQRFH FAETTLDLWF GDIADNLPQL GDYMQNRIDA WFLDGFSPSK
NPQMWNDKLY QQIFYYSKPQ GTFATFTAAS AVRKGLISAG FEVQKRKGYG KKRECLCGIK
NSTQQQNAKF PWYLNQPASL LSEDIAIIGG GIASLFTALS LLKRGAKVTL YCEDEQLALN
ASGNKQGAFY PQLSDDDDRN IRFYVHAFFY ALQQLQWAIK QGIEFEHEFC GVALCAYDHK
SAVKLAKISS YQWSKSLYQN LNKEQLSEKI GLPLDCAGGF IPQGAWLAPR QFVQNAFSYL
QQLGLEIKTS QKITALDYRN LQWVLTNEQN ETFNHQVVVL ANGYQITDFV QTAKLPLYPV
RGQVSQIPTS ANLLKLKSVL CYDGYLTPAD KMKQSHCLGA SHIRNNKDRH FSHQEQRENQ
QKIQQNLAST DTDKNMDWLQ DIDISANIAR IGVRCSVRDR VPIMGNVPHF EQQCLDYRNI
FNLRRRKQPI PDAAQWKNLY LIGALGSRGL TSAALLGETL ASLIYAEPLP LSEDILHNLS
PNRSWIRKLL KGTEIK
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