Gene HS_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0659 
SymboluvrC 
ID4240147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp705521 
End bp707350 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content37% 
IMG OID638104211 
Productexcinuclease ABC subunit C 
Protein accessionYP_718871 
Protein GI113460804 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.25379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATG CCAAAAACTT TCTTGCCAAT GTAACGCACC AGCCCGGTGT ATACCGAATG 
TTTGATGAAA AAGGGCAGGT GATTTATGTT GGTAAGGCAA AAGATTTGAA AAAGCGTTTA
TCCAGCTATT TTCGCACTAA TTTGAACAGT AAAAAAACTT CCGCACTGGT TTCGCATATT
CATTCAATAG AAACAACAAT CACCGCTTCA GAAACTGAAG CATTATTGCT TGAACATAAT
TATATTAAAG CTTTTCAGCC CCGTTACAAT GTTTTATTAC GTGATGATAA ATCCTATCCC
TATATTCTAT TAACGAAAGA ACGTCATCCT AGAATTACCT CGCATCGAGG TTCAAAAAAA
GTACAAGGTG AGTATTTTGG TCCTTATCCC CATGCAGGAG CGGTACGTGA AACTCTCTCT
TTGTTGCAAA AATTATTTCC TATTCGGCAA TGTGAAAACT CGGTATATAA CAACCGCTCT
CGCCCTTGTT TGCAGTATCA AATCGGGCGT TGCAGTGGTC CTTGTATTGA TGGTTTAGTA
TCTGATGAAG AATATCAGCA ACAGGTTGAT TTTGCTCGGC TATTTTTACA AGGTAAAGAT
CAGCAAGTGT TGGAGCATTT GATCAAAAAA ATGGAACAAG CAAGTATGCA ACTTAATTTT
GAGCAGGCAG CTTATTTCCG TGATCAAATT CAGGCGATTC GTGCGGTAAT TGAAAAACAA
TTTGTTTCTA ACGAACGTTT AGATGATATG GATATTCTGG CAATTGCTTA TCAGCTTGGT
ATTGCTTGTG TACAAGTTTT ATTTATTCGT CAGGGAAAAG TATTAGGTAA TCGCAGTTAT
TTTCCCAAAG TGCCGGCAAA TACGGATTTA AGTGAATTAA CCGAAACGTT TGTCGGACAG
TTTTATTTAC AGGGGCATCA AGGTCGGATT ATACCAAGTA CCATTATTGT TGATCATGTT
TTGAATGAAA AACATGAACT TGAGGTTTTA TTAACAGAAC AAGCCGGACG TAAAGTAAAT
ATTCAAGATA ATGTGAAAGG CAATAAAAGC AAATTTTTAC ATTTGGCTCA AATGAATGCA
CAAGCCGCAT TAGTAACACA GCTTAAACAA GCTAATTTAA TACAAGAGCG TTATCAGGCA
TTACAAGAAC TTTTGTCTTT AACTACCATT AAACGTATGG AATGTTTTGA TATCAGTCAT
ACTATGGGAG AGCAAACAAT AGCTTCTTGC GTTGTTTTTG ATACTGAAGG ACCGTTGAAA
TCAGATTATC GTCGTTTCAA CATAAGCGGA ATTACTGCAG GCGATGATTA TGCCGCTATG
GAGCAGGCTT TGTTGAAACG TTATGATCGC CCATTAGAAA ATGAGAAAAT TCCAGATATT
ATTTTTATTG ATGGGGGAAA GGGGCAATTA AACCGTGCTT TACAAGTTTT TGCACAATTA
AATGTATCTT GGGATAAAAA TAAACCGATC TTAATTGGAG TAGCAAAAGG GGTAGATCGT
AAAGCAGGTT TAGAGACGTT AATTATTAGT AAACAAAATA AGGAAGTGAA TTTACTGCCT
GACAGTCTTG CCCTTCATCT TATTCAACAT ATTCGTGATG AAAGTCATTA TCATGCCATT
GGCGGTCATC GTAAAAAACG TCAACAGGCT TTTACTCAAA GCGGTCTAGA AGCCATCGAA
GGTGTTGGAG CAAAACGAAG ACAAGCTTTA TTAAAATATT TAGGGGGCAT GCAAGGTGTA
AAAAATGCGA CTTTAGCAGA AATTTCCTCC GTTCCAGGCA TTTCTGCTGC GTTGGCGGAA
CGGATTTATG AAACGCTAAG AAGTGAATAA
 
Protein sequence
MFDAKNFLAN VTHQPGVYRM FDEKGQVIYV GKAKDLKKRL SSYFRTNLNS KKTSALVSHI 
HSIETTITAS ETEALLLEHN YIKAFQPRYN VLLRDDKSYP YILLTKERHP RITSHRGSKK
VQGEYFGPYP HAGAVRETLS LLQKLFPIRQ CENSVYNNRS RPCLQYQIGR CSGPCIDGLV
SDEEYQQQVD FARLFLQGKD QQVLEHLIKK MEQASMQLNF EQAAYFRDQI QAIRAVIEKQ
FVSNERLDDM DILAIAYQLG IACVQVLFIR QGKVLGNRSY FPKVPANTDL SELTETFVGQ
FYLQGHQGRI IPSTIIVDHV LNEKHELEVL LTEQAGRKVN IQDNVKGNKS KFLHLAQMNA
QAALVTQLKQ ANLIQERYQA LQELLSLTTI KRMECFDISH TMGEQTIASC VVFDTEGPLK
SDYRRFNISG ITAGDDYAAM EQALLKRYDR PLENEKIPDI IFIDGGKGQL NRALQVFAQL
NVSWDKNKPI LIGVAKGVDR KAGLETLIIS KQNKEVNLLP DSLALHLIQH IRDESHYHAI
GGHRKKRQQA FTQSGLEAIE GVGAKRRQAL LKYLGGMQGV KNATLAEISS VPGISAALAE
RIYETLRSE