Gene HS_0644 details

Gene Information

• Locus tag: HS_0644
• Symbol: udk
• ID: 4240132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 691560
• End bp: 692201
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638104196
• Product: uridine kinase
• Protein accession: YP_718856
• Protein GI: 113460789
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0572] Uridine kinase
• TIGRFAM ID: [TIGR00235] uridine kinase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000687916
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGATC AGTCTTGTAT TATTATTGCC ATTGCTGGTG CGTCAGCATC GGGGAAAAGT 
TTAATTGCAT CGACTATTCA TGAGGAACTG TGTAATGAAT TAGGCTGTGA GGAAATTGGT 
ATTGTGACGG AAGACAGTTA TTACAAAGAC CAAACGCATC TTTCTTTTGA GGAACGTATT 
AAAACAAATT ATGATCATCC AAATTCAATG GATCGTGATT TACTAATTCA ACATTTATGC 
GATCTAAAAA AGGGTAAAGC CGTTGATATT CCAGTTTATA GCTATGTTGA ACATACAAGA 
ACCCAAGAAG TAACTCGGTT TGAGCCTAAA AAAGTAATTA TTTTGGAGGG GATCTTGTTA 
TTAACAGATG AGCGTATTCG TCAGGAGGTA AATATGTCGG TTTTTGTTGA TACACCTTTG 
GATATTTGCT TTATTCGCCG TTTACAACGT GATATGGAAG AACGTGGTCG CTCATTACAG 
TCTGTCATTG ATCAATATAA ATCCACGGTT CGTCCAATGT TCTTACAATT TATTGAGCCA 
TCAAAACAAT ATGCTGATAT AGTTGTTCCT CGTGGTGGCA AGAATCGAGT TGCGATTAAT 
ATGTTAAAAG TGCAAATTCA ACATTTGTTA AATAACAAAT AA 

 

Protein sequence

MSDQSCIIIA IAGASASGKS LIASTIHEEL CNELGCEEIG IVTEDSYYKD QTHLSFEERI 
KTNYDHPNSM DRDLLIQHLC DLKKGKAVDI PVYSYVEHTR TQEVTRFEPK KVIILEGILL 
LTDERIRQEV NMSVFVDTPL DICFIRRLQR DMEERGRSLQ SVIDQYKSTV RPMFLQFIEP 
SKQYADIVVP RGGKNRVAIN MLKVQIQHLL NNK