Gene HS_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0630 
Symbol 
ID4240117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp675539 
End bp676570 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content43% 
IMG OID638104182 
Producthypothetical protein 
Protein accessionYP_718842 
Protein GI113460775 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTT TACCGATTTT TCTTGTAGTT GATGTTTCTG AAAGTATGGC AGGCGATAGC 
CATAGACAAA TGCAAGAAGC GATAAACCGT CTTGTGCAGC GTTTGCGTTG TGATCCTTAT
GCACTTGAAA GCGTTTATAT CTCAGTGATT GCTTTTGCGG GGGCGGCTGG CGTGATTGCT
CCTTTAACCG AATTGATGTC GTTTTATGCC CCACGTTTAC CAATGGGATC AGGCACATCA
CTAGGTGCGG CACTAAATCT TACAATGGAC GAAATTCAAC GTAATGTCGT ACGTAGCAGT
GGCGATCAAA AGGGCGATTT TAAACCGTTG GTTTATATTT TGTCTGACGG TGTGGCAACT
GATGATCCGA CTTCGGCAAT TCAACGTTGG CAACAAGAAT TTAAATCTCG CACCAAATTA
ATTGCAGTGG GTTTGGGGAA TTTTGCTGAT CTTTCTGCAT TAAATCAGAT TGCGGAACTG
ACTTTCCGTA TTGACGATCA GGATTTAGAA GAGGCTTATC TCACACTGAC ACGCAGTATC
GAAGATTCTA TTTTAAGTCA AAGCCGTTCT TTGGGTGTTG CACCGCTTAC GATTGATGAA
AATCAGTCTG GTGTTTCATT GATTAAGAAT GAACAACAAG CGGTGGGCAT TGATGAAAAT
TATGCGATTT TGACCGGGCT TTGTCGTAAA GAAAAATTGC CTTACTTGAT GAAATACGAA
CGTCAAGACG GTTTACCGGC GGAAATGCGT TTATTTCGTT ATGTGGGTAC TTACCCTGCC
GAAAAAGATT TTGAAGATTG GTCAGATCAT CGCCCAAATG AAAGCAAAGT AAAAGCCTCT
GAATTGTGGG GCGGGGGAGG TTGTCCGCAT TGTGGTTCTG CTTTTGGTTT GGCAGTTTGT
GCCTTTTGTG ATCAAATTTT CTGTATTGAC GGTGAAGGAA AGGCGATTTG CCCGAAATGC
GAAATGGTGA ACGAATTTGT TGCAGGTAAG GGTGAAAGTG TTGATTTTGA AATTAATCGT
TCAAGGGGGT AA
 
Protein sequence
MRRLPIFLVV DVSESMAGDS HRQMQEAINR LVQRLRCDPY ALESVYISVI AFAGAAGVIA 
PLTELMSFYA PRLPMGSGTS LGAALNLTMD EIQRNVVRSS GDQKGDFKPL VYILSDGVAT
DDPTSAIQRW QQEFKSRTKL IAVGLGNFAD LSALNQIAEL TFRIDDQDLE EAYLTLTRSI
EDSILSQSRS LGVAPLTIDE NQSGVSLIKN EQQAVGIDEN YAILTGLCRK EKLPYLMKYE
RQDGLPAEMR LFRYVGTYPA EKDFEDWSDH RPNESKVKAS ELWGGGGCPH CGSAFGLAVC
AFCDQIFCID GEGKAICPKC EMVNEFVAGK GESVDFEINR SRG