| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0615 |
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| Symbol | acrB |
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| ID | 4240101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 658237 |
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| End bp | 661353 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638104167 |
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| Product | cation/multidrug efflux protein |
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| Protein accession | YP_718827 |
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| Protein GI | 113460760 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA CCGATATATT TATTCGTCGT CCCGTATTAG CTGTGTCAAT CAGTTTGCTT
ATCATTATTT TAGGGTTGCA AGCAATTTCA AAATTGAGTG TACGTGAATA TCCTAAAATG
ACGACAACGG TAATTACTGT AGCAACGGTA TATCCGGGGG CAGATGCTAA TTTGATGCAG
GCATTTGTAA CCTCTACCTT AGAAGAGGCT ATTGCCCAAG CGGATAATAT TGACTATATG
TCATCAAGCA GTGCGGCTAA TTCTTCGATA ATTACAGTTA AAATGAAACT GAATACAGAT
CCTAATGGTG CTTTAGCTGA TGTATTGGCA AAAGTGAATT CTGTGCGTTC AAGATTACCG
CATAATATAG AAGATCCTGT GATTTCATCT TCAACAGGTG GTACAGGAAT TATGTATATC
AGTTTTTATT CTGATAAATT GGATTCCAGT CAAGTGACGG ATTATATCGA AAGGGTTGTT
AAGCCTCAGT TATTTACTAT TGAAGGGGTA GCGAAAGCTC AAATTTTCGG GGCGGCTCAA
TACGCATTGC GTATTTGGTT GGATCCCGAA AAAATGGCGG CACAAAATCT TTCCGCACTG
GCTGTAATGT CAGCTTTATC GGCTAACAAT GTGCAAACAG CGGCTGGAAG TGCGGATGGT
TATTATACCG TTTATAAAAA TAAAGTCGGG ACAACCACTA ATTCTGTTAA GGATTTAGAA
AATTTAATTG TTTATTCAAA AGACGATAAT CTTGTACGTT TGCGTGATAT TGCTACTGTT
GAGCTAAATA AAGAAAGTGA TAGTACAAGA GCAACAGCAA ACGGTGCTGA TTCTGTCGTT
TTAGCTATTG AACCGACTGC AACAGCCAAT CCATTAACGG TAGCGGAAAA TGTTCGTCCA
TTGTATGCAC AAATTAAACA GAATTTACCA AGCAGTATGT ATTCTGATTT GCTTTATGAT
CGTACTATCG CTATCAATAG TTCTATTAAT GAAGTGATCA AAACTATTAT TGAAGCTACT
GTTATTGTTT TGGTTGTGAT CTTACTATTT ATTGGTTCTT TACGTGCAAT TTTAATTCCT
ATTATTACTA TTCCAATTTC ATTAATTGGC GTAATCATGA TTTTGCAATT ATTTGATTTC
TCCATTAATT TGATGACGCT ATTGGCAATG ATCTTAGCTA TTGGGTTAGT GGTAGATGAT
GCGATTGTGG TATTGGAAAA TGTGGATCGT CATATTAAAG CCGGTGAAAC ACCGTTTCGT
GCCGCAATTA TTGGTACTCG TGAAATTGCA ATACCTGTTA TCTCTATGAC AATTGCATTG
ATTGCAGTGT ATTCACCTAT GGCACTAATG GGCGGAATTA CGGGATCTTT ATTTAAAGAG
TTTGCTTTGA CACTGGCAGG TGCGGTCTTT ATTTCAGGCA TTGTAGCATT AACTTTGTCG
CCAATGATGA CAAGTAAGTT ACTAAACAAT AATGCAAAAC CCAATCGTTT GGAACAGCAA
ATTGAAAAAT CATTAACTCG GTTAACCAAT GGGTATGTTT ATGTTTTAAA TTTAGTTATG
GCTAACCGTA AGTGTATGCT TGCTTTTGCT GCTATTATTT TTGCCATGTT ACCATTTTTG
TTTACTTCCC TTTCCAGTGA ATTGACACCA GCGGAAGATA AAAGAGCATT TATCGCTATT
GGTTCCACAC CTTCCAATAT GAATGTAGAT TATGCTCAGG AGGCAACGAA ACAGTATGTT
GATCTGCTGA ATAAAACAGA AGAAGTACAA TTTACAATGT CTATTGCCGG TTTTCCAAGT
TCTAGCGATA CATTAAATGT TGTAACCTTG AAAGATTATA AAGAAGGTGG TCGTAGTCAG
TCAGAGATTA TAGAAGAGTT GAATCGAAAG GCAACGCAAA TTCCGGAAGT GAGTGTTTCT
GCCTTTAATT TTCCTGAAAT TGATACGGGA GAATCCGGAG CACCGATAGG CTTTGTTATT
AGTACAGCAA ATAACTATCG TGATTTAGCA CCGGTTGCAG AAGCATTTTT AGCGAAAATG
CGTGAATCAG GCAGATTTGT TTATACGAAT CTCGACTTAA AGTTTGATAC CGCTGAAATG
CAAATTAGCA TAGATAAAGA AAAAGCCGGA AGTTATGGTG TTTCTATGCA ACAAATTAGT
AGCACTTTAG GGAGTTATTT ATCCGCAGCT ACGGTAAGTC GTGTTGATAT AGACGGGCGA
GCTTATAAGG TTATAGCACA AGTCAAAAGA GCGGATCGTT TAACACCGGA AAGTTTGAAA
AATTTCTATG TATCCGCAAG TAACGGAAAA AGTATTCCGT TGAGTAGCTT AATTAGCATG
GAGTTGGTAA CACAACCGAC ATCATTGTCA AGATTTAGTC AGTTAAACTC GGCATTAATT
CAAGCTGTTC CAATGCCGGG AGTTTCAGTA GGTGATGCGG TTCAATGGCT GAAAGATGCA
GCGACGGAGT TACTGCCAAA AGGATATAAC TATGATTTTC GTGGCGAAGC ACGTCAGCTT
GTACAAGAAG GGAATGCGTT AGTAATAACT TTCGTGTTAG CTGTTCTTAT TATTTTCTTA
GTATTGGCAA TTCAGTTTGA ATCTATTCGG GATCCATTGG TTATTATGGT TGCTGTGCCT
TTGGCGGTAA GTGGAGCGTT ACTGGTACTT AACTTCTTGA GCTTATTAAC TGATATGAGA
ATTTTACGGT TATCAGGAGT TACCCTGAAT ATTTACTCAC AAGTAGGGTT AATTACATTG
GTTGGTTTAA TTACTAAACA TGGTATTTTA ATGTGTGAAG TAGCAAAAGA AGAACAACTT
TATTTGGGTA AATCACGAAT TGATGCCATC ACTGAAGCGG CAAGAGTGCG TTTACGCCCT
ATTTTAATGA CAACAGCGGC AATGGTTGCT GGATTAATTC CGCTCTTGTT GGCATCGGGA
GCCGGTGCGG CATCTCGTTT TAGTATTGCT ATCGTATTAG TTGCAGGGCT TTCAATAGGC
ACTTTATTTA CGTTGTTTGT ATTGCCCGTA ATTTATTCTT ATATTGCCAG TGAACACAAA
CCTTTACCTG AGTTTGATGA AAGTATAAAA CCATTGGTAA CTGATCAGCA TCATTAA
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| Protein sequence | MKFTDIFIRR PVLAVSISLL IIILGLQAIS KLSVREYPKM TTTVITVATV YPGADANLMQ
AFVTSTLEEA IAQADNIDYM SSSSAANSSI ITVKMKLNTD PNGALADVLA KVNSVRSRLP
HNIEDPVISS STGGTGIMYI SFYSDKLDSS QVTDYIERVV KPQLFTIEGV AKAQIFGAAQ
YALRIWLDPE KMAAQNLSAL AVMSALSANN VQTAAGSADG YYTVYKNKVG TTTNSVKDLE
NLIVYSKDDN LVRLRDIATV ELNKESDSTR ATANGADSVV LAIEPTATAN PLTVAENVRP
LYAQIKQNLP SSMYSDLLYD RTIAINSSIN EVIKTIIEAT VIVLVVILLF IGSLRAILIP
IITIPISLIG VIMILQLFDF SINLMTLLAM ILAIGLVVDD AIVVLENVDR HIKAGETPFR
AAIIGTREIA IPVISMTIAL IAVYSPMALM GGITGSLFKE FALTLAGAVF ISGIVALTLS
PMMTSKLLNN NAKPNRLEQQ IEKSLTRLTN GYVYVLNLVM ANRKCMLAFA AIIFAMLPFL
FTSLSSELTP AEDKRAFIAI GSTPSNMNVD YAQEATKQYV DLLNKTEEVQ FTMSIAGFPS
SSDTLNVVTL KDYKEGGRSQ SEIIEELNRK ATQIPEVSVS AFNFPEIDTG ESGAPIGFVI
STANNYRDLA PVAEAFLAKM RESGRFVYTN LDLKFDTAEM QISIDKEKAG SYGVSMQQIS
STLGSYLSAA TVSRVDIDGR AYKVIAQVKR ADRLTPESLK NFYVSASNGK SIPLSSLISM
ELVTQPTSLS RFSQLNSALI QAVPMPGVSV GDAVQWLKDA ATELLPKGYN YDFRGEARQL
VQEGNALVIT FVLAVLIIFL VLAIQFESIR DPLVIMVAVP LAVSGALLVL NFLSLLTDMR
ILRLSGVTLN IYSQVGLITL VGLITKHGIL MCEVAKEEQL YLGKSRIDAI TEAARVRLRP
ILMTTAAMVA GLIPLLLASG AGAASRFSIA IVLVAGLSIG TLFTLFVLPV IYSYIASEHK
PLPEFDESIK PLVTDQHH
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