Gene HS_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0579 
Symbol 
ID4240063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp614496 
End bp615212 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content35% 
IMG OID638104129 
ProductD-alanyl-D-alanine carboxypeptidase-related protein 
Protein accessionYP_718791 
Protein GI113460724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGATTTA TTATCATATT TTGGAAAAAT TGTTTAATGA ACAATAGGTT ATCAAAAATC 
CTCACAGGAA AAAGTCGTGA ACATTTAATT TCATTACCGA ATACGCTTTC GGCTAATCAT
TTTTTGCAGA TGGAAGTTGT CGCTGCTTTT TTGCAGTTAC AGCAAGCTGC AAAGCAAGCT
GGCTTTAATT TACAGCCAGT AAGTAGTTTT CGTGATTTTG AACGTCAGCG TTCAATTTGG
AATACAAAAT TTTATGGAGA ACGTAAAGTT CATGATGATC AAGGAAATCC GTTAGATTTA
ACCGCACTTG ACGATTGGCA AAAAGTACAA GCGATTTTGC GTTGGTCTGC GATGCCGGGA
GCAAGTCGCC ATCATTGGGG AACGGAAATC GATATTTTTG ATCCTGATTT ATTGCCAAAA
GGACAATCTT TACAACTTGA GCCTTGGGAA TATCAAACTG GTGGTTATTT TCAACGCTTA
ACTAATTGGT TATTAGTTAA TGCACAACAA TTTGGTTTTT ATTTTCCATT TTTTGAGTTA
AAAGATAAAA AAGTGGGCAA TGAACTTTGG CATTTAAGCT ATTTTCCCAT TGCAGATATA
TATCAACAAC AATTTTGCCC TGAGTTTTTA TCACAAGCGT GGTTCGAGGA AAACGTTGCG
GGTAGCGAGA TATTATTGAA GCATCTTGAT GAAATATTTA GGGATTTTTT GATTTAA
 
Protein sequence
MRFIIIFWKN CLMNNRLSKI LTGKSREHLI SLPNTLSANH FLQMEVVAAF LQLQQAAKQA 
GFNLQPVSSF RDFERQRSIW NTKFYGERKV HDDQGNPLDL TALDDWQKVQ AILRWSAMPG
ASRHHWGTEI DIFDPDLLPK GQSLQLEPWE YQTGGYFQRL TNWLLVNAQQ FGFYFPFFEL
KDKKVGNELW HLSYFPIADI YQQQFCPEFL SQAWFEENVA GSEILLKHLD EIFRDFLI