Gene HS_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0575 
SymbolhtrB 
ID4240059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp610451 
End bp611389 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content35% 
IMG OID638104125 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_718787 
Protein GI113460720 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA CATCAATTCC ACAATTTAAT ATTGAATTTC TTAAGCCTAA ATACTGGCTT 
TTCTGGTTAG GTTTTTTATT TTTTCGTCTT ATTTTATTGC TCCCCTACCC AATCTTACTT
AAAATCGGCA ACGGTTTAGG TTCTTTATTT TCTCATTTGA AAATCGGTCA ACGCAGAACA
AAAATCGCTC GCCAAAATTT ACAGCTCTGT TTTCCTCATT ATTCTGAACA GGAAATCAAC
GATATATTAC AATCCAATCT TAAAGCAACA GGCATGGCAA TTATTGAAAC CGGTATGGCT
TGGTTTTGGT CAGATAAACG AATAAAAAAA TGGAGCAAAA TTGAAGGGCT TGAATATTTA
AAAGAAAATC AACAAGACGG TATTATTCTT GTAGGTATTC ATTTTCTCAC TTTAGAATTA
GGTGCAAGGA TTATTGGTCT ATCTCATCCA GGCATTGGCA TTTATCGACC GCATGATAAT
CCTTTAATGG ATTGGTTACA ATACCGTGGA CGTGCAAGAT CAAATAAAGG TTTATTGGAT
CGCAAAGATT TACGTGCAAT GATTAAAGCT ATTCGTCATG GTGAAATGAT TTGGTACGCT
CCGGATCATG ATTATGGAAG AAAAAATGCT GTTTTCGTAC CTTTTTTTGC TGTACCGGAG
GCGGCAACGA CAACCGGAAG TTACTACTTA ATAAAATCAT CACCTAAGAG CAAAGTTATC
CCTTTTACAC CGCTTCGTAA CAAAGATAAC TCTGGATATA CGTTGAACAT TTCAGCACCT
GTTGATTTTT CGGATATTCT CCATGATGAA ACGGCAATAG CGACACGAAT GAATAAGATT
GTAGAAAAGG AAATATTGCA AGATGTAACA CAATATATGT GGTTACATCG CCGATTTAAA
ACCAGACCTG ATGAACATCA ACAAAGTTTA TACGAATAA
 
Protein sequence
MAKTSIPQFN IEFLKPKYWL FWLGFLFFRL ILLLPYPILL KIGNGLGSLF SHLKIGQRRT 
KIARQNLQLC FPHYSEQEIN DILQSNLKAT GMAIIETGMA WFWSDKRIKK WSKIEGLEYL
KENQQDGIIL VGIHFLTLEL GARIIGLSHP GIGIYRPHDN PLMDWLQYRG RARSNKGLLD
RKDLRAMIKA IRHGEMIWYA PDHDYGRKNA VFVPFFAVPE AATTTGSYYL IKSSPKSKVI
PFTPLRNKDN SGYTLNISAP VDFSDILHDE TAIATRMNKI VEKEILQDVT QYMWLHRRFK
TRPDEHQQSL YE