Gene HS_0558 details

Gene Information

• Locus tag: HS_0558
• Symbol: rlfA
• ID: 4240041
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 592523
• End bp: 593221
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638104107
• Product: hypothetical protein
• Protein accession: YP_718769
• Protein GI: 113460703

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0683271
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTA ATATATATTG TGATGAATCT TGTCATTTAC CAAATGACAA AATGCCAGTA 
ATGGTATTGG GTGCAATTCG TTGTCCTGTG GAAAAAACCA AAGAAATAGC CAAAAGATTG 
AGAGAAATTA AAGTAAAGCA CGGATTTCAT CCTAATTTTG AAATTAAATG GAATAAAATA 
TCAAAATCTA AGGTAGATTT TTATTTAGAT ATTATTGACT ATTTTTTTGA TGATGATGAT 
TTGAGTTTTA GAGGGCTTAT TATTGATAAG TCTAAACTAA ACCATGTCCA TTATAATCAA 
ACCCATGATG ATTGGTATTA CAAAATGCTG TTTTTACTTT TGAAAAATTT ACTTATGCCT 
AAGGTAAGCT CGTTTATTTA TTTAGATAAA AAAGATACAC AAAGTGCAAT CAAAGTAAAA 
AAACTACATG ATGTTTTATG CCATAGTACT TATGACTTTG AACAAAAATA TATCAAACGT 
GTACAAGTTG TTGAATCTCA TCATGTAGAG CAATTGCAGC TTGCTGATCT CTTACTTGGT 
GCGCTAGGTT ACTATCATCG TCATTTATCA AGTAATGAAG GCAAAAAAAT AGTTATAAAT 
CGTATTAAGG AGCGTTCTGG ATACGTTTTA GATAAAAATA CATTACCAAC AGAAAGTAAA 
TTTAATTTAT TTCATTGGGA AGGAAATTAT TATGGATGA 

 

Protein sequence

MSFNIYCDES CHLPNDKMPV MVLGAIRCPV EKTKEIAKRL REIKVKHGFH PNFEIKWNKI 
SKSKVDFYLD IIDYFFDDDD LSFRGLIIDK SKLNHVHYNQ THDDWYYKML FLLLKNLLMP 
KVSSFIYLDK KDTQSAIKVK KLHDVLCHST YDFEQKYIKR VQVVESHHVE QLQLADLLLG 
ALGYYHRHLS SNEGKKIVIN RIKERSGYVL DKNTLPTESK FNLFHWEGNY YG