Gene HS_0551 details

Gene Information

• Locus tag: HS_0551
• Symbol: tktB
• ID: 4240034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 584087
• End bp: 586075
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638104100
• Product: transketolase
• Protein accession: YP_718762
• Protein GI: 113460696
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAAATG CAATCCGTTT TTTAAGTATG GATGCGGTAC AAAAAGCAAA ATCTGGGCAT 
CCGGGAGCTC CGATGGGAAT GGCGGATATT GCGGAAGTAT TATGGCGTGA TTTTTTAAAT 
CATAATCCGA CTAATCCTCA ATGGGCAAAT CGTGATCGTT TTGTGTTATC TAACGGTCAT 
GGCTCAATGT TAATTTATAG TTTACTGCAT CTCACCGGTT ACGATCTTTC TATCGAAGAT 
TTAAAACAAT TTCGTCAATT ACATTCCAAG ACTCCGGGGC ACCCTGAATA CGGTTATGCT 
CCGGGTATTG AAACCACAAC AGGTCCATTA GGTCAAGGCA TTACTAACGC TGTAGGCATG 
GCGATTGCAG AAAAAACGTT AGCCGCACAA TTTAATCGAG CAGGTCATGA CATTGTTGAT 
CATCATACTT ACGTTTTTCT AGGGGATGGT TGCTTAATGG AGGGTATTTC TCATGAGGCT 
TGTTCATTAG CCGGCACGTT AGGTTTGGGT AAATTGATTG CGTTCTATGA TGACAATAAT 
ATCTCAATTG ACGGTCATGT TGACGGTTGG TTTACTGATG ATACACAAAA ACGTTTTGAG 
GCTTATGGTT GGCATGTTAT TCCTGCTGTT GATGGTCATA ATGCGGAACA AATTGTTGGT 
GCAATAAAAC AAGCTCAGGC TGAGAAAAAT AAACCAACTT TAATTATGTG TAAGACGATT 
ATTGGCTATG GTTCTCCAAA TAAGCAAAAT ACTCATGATA GCCATGGTGC ACCTTTGGGC 
GATGAAGAAA TCGCTTTAAC TCGTCAAGCA TTAAATTGGA ATTACGCACC TTTTGAAATT 
CCTGCTGATA TTTATGCAAA ATGGAATGCT CACGAAAAAG GACAAGTGGC GGAAAACGCA 
TGGAATGAAA AATTTGCCGC TTATGAGAAA GCTTATCCTG AATTAGCAGT TGAATTTAAA 
CGCCGTTTAA ATGGGGAATT ACCGGCAAAC TGGGCAACAG AAAGCCAATC CTTTATTGAA 
AAATTACAAG CAAATCCGGC AAACATCGCC AGTCGCAAAG CATCACAAAA TGCTATTGAG 
GCTTACGCAA AATTATTACC GGAGTTTTTA GGCGGTTCAG CTGATTTAGC AGGGTCAAAC 
TTAACGTTAT GGTCCGGTTC AAAACCAATT CGTGCCACAG AAAATGTAGA CGGTAACTAC 
ATTAATTATG GTGTGCGTGA ATTTGGTATG TCTGCCATTA TGAACGGTAT TGCATTACAC 
GGCGGATTTA TTCCTTACGG TGCAACGTTC TTAATGTTTA TGGAATATGC ACATAATGCA 
GTGCGTATGG CAGCCTTGAT GAAACAACGT TCATTATTTG TTTATACGCA TGACTCTATC 
GGTTTAGGAG AAGACGGTCC GACTCATCAA CCAGTTGAGC AAACAACCGC ACTTCGCTTA 
ATTCCAAATT TAGAAACATG GCGACCTTGC GACCAAGTGG AATCTGCAAT CGCATGGAAA 
GCGGCGGTTG AACGTCAAGA CGGTCCAAGT GCATTAATTT TCACTCGACA AAATCTTGCT 
CAAATGAACC GCACTTCTGA GCAATTGGAA AACGTGAAAC GTGGCGGTTA TATCTTGCGT 
GCATGCTGTG AAAAAGGTGA TTGTCCGGAT TTAATCTTGA TCGCCACCGG TTCTGAAGTG 
GAATTAGCGA TGAAAGCAGC GGAAGCGTTA GATGCGGAAG GCGTGAAAGT CCGTGTGGTA 
TCAATGCCGA GTACGAATGT ATTTGATAAA CAAGATGTTG CGTACCGTGA GGCAGTATTA 
CCAAGTGCGG TGACTAAACG CGTTGCAATT GAAGCGGGTA TTTCAGATTT CTGGTACAAA 
TATGTTGGTA CTAACGGACG TATCATTGGT ATGAATAGCT TCGGTGAATC AGCACCAGCA 
GATCAACTGT TTAAACTCTT TGGCTTCACT GTTGAAAATA TTGTGTCAAA GGCAAAAGAG 
ATTTTATAA 

 

Protein sequence

MANAIRFLSM DAVQKAKSGH PGAPMGMADI AEVLWRDFLN HNPTNPQWAN RDRFVLSNGH 
GSMLIYSLLH LTGYDLSIED LKQFRQLHSK TPGHPEYGYA PGIETTTGPL GQGITNAVGM 
AIAEKTLAAQ FNRAGHDIVD HHTYVFLGDG CLMEGISHEA CSLAGTLGLG KLIAFYDDNN 
ISIDGHVDGW FTDDTQKRFE AYGWHVIPAV DGHNAEQIVG AIKQAQAEKN KPTLIMCKTI 
IGYGSPNKQN THDSHGAPLG DEEIALTRQA LNWNYAPFEI PADIYAKWNA HEKGQVAENA 
WNEKFAAYEK AYPELAVEFK RRLNGELPAN WATESQSFIE KLQANPANIA SRKASQNAIE 
AYAKLLPEFL GGSADLAGSN LTLWSGSKPI RATENVDGNY INYGVREFGM SAIMNGIALH 
GGFIPYGATF LMFMEYAHNA VRMAALMKQR SLFVYTHDSI GLGEDGPTHQ PVEQTTALRL 
IPNLETWRPC DQVESAIAWK AAVERQDGPS ALIFTRQNLA QMNRTSEQLE NVKRGGYILR 
ACCEKGDCPD LILIATGSEV ELAMKAAEAL DAEGVKVRVV SMPSTNVFDK QDVAYREAVL 
PSAVTKRVAI EAGISDFWYK YVGTNGRIIG MNSFGESAPA DQLFKLFGFT VENIVSKAKE 
IL