Gene HS_0546 details

Gene Information

• Locus tag: HS_0546
• Symbol: tatB
• ID: 4240029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 579627
• End bp: 580181
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638104095
• Product: Sec-independent protein translocase TatB
• Protein accession: YP_718757
• Protein GI: 113460691
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1826] Sec-independent protein secretion pathway components
• TIGRFAM ID: [TIGR01410] twin arginine-targeting protein translocase TatB

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0338554
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTGATA TTGGTTTCTC CGAACTTGTT TTACTTTTTG TTGTGGGCTT GATAGTACTG 
GGACCACAGC GTTTGCCTGT AGCTGTTCGT ACGGTAATGG GTTGGGTAAG GACTGTGCGA 
AGCTTAGCGA CAAATGTACA AAATGAACTT AGTCAGGAAT TAAAACTGAA AGAGTTACAA 
GAAAGCATTA AAAAAGCTGA AGATCTCAAT ATTTCCCAAT TATCTCCGGA ACTTAGTGAA 
ACCGTAGAAG AATTACGTCA ATCAGCACAA AAAATTAAAA TGAATTTAGA GGAGAAAGCT 
GCTGAAACAA ATTCTTCTGT TGAAGAGCAG GTGCAAGAAC TGAAAAGTGC GGTGCAAAAT 
TCACAGGGTA CTGCAACGAC TGAAATAGAA AAAAATTTTG ATTTTCCTTC TGGTGAGTTA 
TCTCCTGCTG AACTTGCAGA GTTAGCTGAG GAAGGAGAGC CTATGCTGGA AATGGGAGAA 
TCTGATTTTT CAGAGGATGA GCAGGCGACT GCTTCATCTA ACGAAACCAT TGAAAATATC 
AAAGAAAAAG TATGA 

 

Protein sequence

MFDIGFSELV LLFVVGLIVL GPQRLPVAVR TVMGWVRTVR SLATNVQNEL SQELKLKELQ 
ESIKKAEDLN ISQLSPELSE TVEELRQSAQ KIKMNLEEKA AETNSSVEEQ VQELKSAVQN 
SQGTATTEIE KNFDFPSGEL SPAELAELAE EGEPMLEMGE SDFSEDEQAT ASSNETIENI 
KEKV