Gene HS_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0519 
SymbolintA 
ID4240002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp562270 
End bp563574 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content37% 
IMG OID638104068 
Productphage integrase 
Protein accessionYP_718730 
Protein GI113460664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTTAA AGGGTGCAAA GCACTTTATT TTTTTCTTTT TTTATACTAC TAAACTTATG 
GCAAGATTAA TCAAACCTCT TTCAAATACA GAAATAGAAA AAGCGAAGAT TAAAAAAAAG
GCTTATCCAT TAAGAGACGG CAACGGGCTT TTTTTATCTG TAGAGATTAG CGGTTCAAAG
ATATGGCGTT TTAACTATTA CAAGCCTTAT ACTAAAAAGC GGACAGAAAT CAGCATTGGC
AAATATCCTG AAATATCACT ACTACAAGCA AGAAAGATAA GAGACGAGTA TTTAGCCCTG
CTCGCTCAAA ATATCGATCC TAAAACACAC AGAGACCAAA AACAAAACAC ACAGGCATTA
GAACGAAACA CTTTTAAATA TGTTTGTGCT AAATGGTATG CTGAAATATA CCCAACAAAA
GCACCCAATG AAGACACTAG AGCGAGGAAT TGGCAAAGGT TAGAAAGGCA TATATTCCCC
AAGCTCGCAG AAATACCACT TTCAGAAATA ACACCTAGAT TATTAATAGA CGTTTACAGA
GAAATAGGGG CTAGCAATAC TCTTGATAAA TTACATAGAC TTGTCAAAGC TACTCTAGAT
TATGGCATTA AGCTAGGCAT TATAGAGGGG CATAATTGCA ATTTAGCAAA AGATGATTTT
ATAGCACCAC TGGCAAAAAA TCACCCAGCT ATTACACCTG CAGAGCTACC GGAGCTATTA
AAGGCAATAA ACACCGCTTT CAAGGAGGGT AAGCTAGAGT TTAATACACT CTTTGCATTT
AACTTGACTT TGCTCACAGG GTTGAGACAG AAAGAGCTAA CACGCATTGA ATGGGCTTTT
ATTGATGATG GTAATAAGTT GCTTATTATC CCCTCGGAGA ACATGAAACA AACTAGAAAG
CTAAGAGAAC AGCCCAAAGA TCATATAATT CCTTTATCCT CACAAATGAT TAAACTTATA
GGCACAATTA GGCAATTTAA CGGCTCAAGC CCTTATTTAT TCCCCAGAGT GAGAAACAGA
AATAAAACCA TAGGACTAGA TACTGTAAGC AATGCGTTAA GGGATAACGG CTATAGAGAT
AAACAAGACG CACATGGGTT GAGGGTAGTA TTTAGATCCT ATCTTAGTCA GATTGGCTTT
TCTGTTGTCG TTGGAGAGTT GGCAATAGCA CACAATTCAA CAGGGAAAGG GAAAATACAG
GCTATATATG ATAGATATGA TTACCTAGAG GAAAGAAAGC AAGCATATCA AGCATGGGGG
GATTATTGCG AAAAGTGCGG AATATTATTA TCACTTTCTG AATAA
 
Protein sequence
MILKGAKHFI FFFFYTTKLM ARLIKPLSNT EIEKAKIKKK AYPLRDGNGL FLSVEISGSK 
IWRFNYYKPY TKKRTEISIG KYPEISLLQA RKIRDEYLAL LAQNIDPKTH RDQKQNTQAL
ERNTFKYVCA KWYAEIYPTK APNEDTRARN WQRLERHIFP KLAEIPLSEI TPRLLIDVYR
EIGASNTLDK LHRLVKATLD YGIKLGIIEG HNCNLAKDDF IAPLAKNHPA ITPAELPELL
KAINTAFKEG KLEFNTLFAF NLTLLTGLRQ KELTRIEWAF IDDGNKLLII PSENMKQTRK
LREQPKDHII PLSSQMIKLI GTIRQFNGSS PYLFPRVRNR NKTIGLDTVS NALRDNGYRD
KQDAHGLRVV FRSYLSQIGF SVVVGELAIA HNSTGKGKIQ AIYDRYDYLE ERKQAYQAWG
DYCEKCGILL SLSE