| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0492 |
|---|
| Symbol | dapA |
|---|
| ID | 4239974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 533075 |
|---|
| End bp | 533971 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638104040 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_718703 |
|---|
| Protein GI | 113460637 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC ACAGACCTTT ATTCTACGGC AGTATCACCG CACTTATCAC ACCAATGAAT
AATCATGGAG AAGTTGATTT TAATGCATTA AAAAAATTAG TTGAATACCA CATTGTCTCA
GGAACTCACG CTATCGTTTC TGTCGGTACA ACCGGAGAAT CAGCTACCTT AAGTATCGCT
GAAAATGTAA AAACAATTTT AAAGACTCTT GAATTTGCCG ATGGAAGAAT ACCTATTATT
GCAGGTACCG GAGCAAATGC AACCAGCGAA GCGATTACGA TGACCAAGCT GTTAAATGAT
AGTGGTGTTG CAGGTTGTTT ATCCGTTGTA CCTTACTACA ATAAACCAAC TCAAGAAGGT
ATGTATCAAC ATTTTAAAGC CATTGCAGAA TGTACGGATA TTCCACAAAT TCTTTACAAT
GTCCCGAGTC GTACCGGTAG CGATCTATTG CCTGAAACTG TTGGTCGTTT ATCTCAAATT
GCAAATATTG TTGGAATTAA AGAAGCAACA GGTGATGTCA GTCGTGTAGC GAAAATTAAA
CAGATGGCGG GGGAAGATTT CATTTTCCTC AGCGGCGATG ACGCAACAGG GCTTGAAAGT
ATGAAACTTG GCGGTCAAGG AGTCATTTCC GTCACAAACA ATATTGCTGC CGCTGATATG
GCAAAAATGT GTGAATTGGC ATTAGCCGGA AAATTTGATG AAGCAGAAAT CATTAATGAT
AAATTAAGAG CTTTACATAA AGATTTATTC ATCGAATCAA ATCCTATTCC GGTAAAATGG
GCAGCTTATA AATTAGGATT AGTCCCTGAT CCGATATTAC GTTTGCCGCT GACAACTTTA
AGCGAACAGG CACAACCGAA AATTATTAAC GCATTAAAAA ATGCCGGATT GCTATAG
|
|---|
| Protein sequence | MTTHRPLFYG SITALITPMN NHGEVDFNAL KKLVEYHIVS GTHAIVSVGT TGESATLSIA
ENVKTILKTL EFADGRIPII AGTGANATSE AITMTKLLND SGVAGCLSVV PYYNKPTQEG
MYQHFKAIAE CTDIPQILYN VPSRTGSDLL PETVGRLSQI ANIVGIKEAT GDVSRVAKIK
QMAGEDFIFL SGDDATGLES MKLGGQGVIS VTNNIAAADM AKMCELALAG KFDEAEIIND
KLRALHKDLF IESNPIPVKW AAYKLGLVPD PILRLPLTTL SEQAQPKIIN ALKNAGLL
|
|---|
| |