Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0488 |
Symbol | hflC |
ID | 4239970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 528381 |
End bp | 529268 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104036 |
Product | HflC protein |
Protein accession | YP_718699 |
Protein GI | 113460633 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAT TCTTAACTCC TATTCTTATC GTATTGGTCG CACTGATTTA TTCAAGTGTT GTGATTATTG ATGAAGGAAC TCGTGGCATT ATGTTACGGT TTAGTAAAGT ACATCGTGAT GTAGATAATA AAGTGGTTGT TTATAGCCCC GGCTTGCATT TTAAAATCCC ATTTATTGAT CACGTCAAAA TCCTTGATGC TCGCATTAGA ACTTTAGACG GTCAACCTGA TCGTTTTGTG ACTGTAGAGA AAAAGGATCT ATTAGTTGAT TCTTATGTTA AATGGAGAAT TAGTGATTTC GGTCGCTTTT ATACAGCCAC TAGTGGCGGA GATTATGTAC AAGCCTCGAA TCTTTTACGC CGTAAAGTAA ATGATCGTTT GCGTTCTGAA ATTGGCTCCA GAACTATTAA AGACATTGTA TCCGGTACTC GTGGTGAATT AATGGAAGAT GCGAAGAAAG CATTGAATAC AGGACAAGAT AGTACTGCTG AATTGGGTAT TGAAGTCGTA GATGTTCGTG TAAAACAGAT CAATTTACCT GATGAAGTAT CTTCTTCAAT TTATCAACGT ATGCGTGCTG AACGTGATGC AGTAGCTCGT GAACATCGTT CACAAGGTAA AGAAAAAGCC GCATTTATTC AAGCTGATGT TGATCGTAAA GTTGTGGTTA TTTTGGCAAC AGCAAGTAAA AAGGCACAAG AGTTGCGAGG TGAAGGCGAT GCAACAGCAG CAAAATTATA TTCAGATGCG TTTGCTCAAG AACCGGAGTT TTTCAGTTTT ATGCGTAGTA TGAAAGCCTA TGAAAACAGC TTTGAAGGTT CGAATAATAT GATGATTTTA AAACCGGGTA GTGATTTCTT CCGTTTTATG GATCACCCTA AAAAGTAA
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Protein sequence | MRKFLTPILI VLVALIYSSV VIIDEGTRGI MLRFSKVHRD VDNKVVVYSP GLHFKIPFID HVKILDARIR TLDGQPDRFV TVEKKDLLVD SYVKWRISDF GRFYTATSGG DYVQASNLLR RKVNDRLRSE IGSRTIKDIV SGTRGELMED AKKALNTGQD STAELGIEVV DVRVKQINLP DEVSSSIYQR MRAERDAVAR EHRSQGKEKA AFIQADVDRK VVVILATASK KAQELRGEGD ATAAKLYSDA FAQEPEFFSF MRSMKAYENS FEGSNNMMIL KPGSDFFRFM DHPKK
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