Gene HS_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0487 
SymbolhflK 
ID4239969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp527119 
End bp528381 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content40% 
IMG OID638104035 
ProductHflK protein 
Protein accessionYP_718698 
Protein GI113460632 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATG AAATGTCGTT CAATAATTCA GATCAAGATC CTTGGGGTAA GCCGGGTAGC 
ACGGGGAAAA AACCGGAAAA TAACCAATCC CATAATGAAG ATAAACAGTC AAATTGGGAG
CAGCCGAATA ACCAACAAAA GAATACTCAA CAATCACCGC CGGATATTGA AGAAATCTTT
AATAATTTGC TGAAAAAAAT CAGTGGTAAA TCTGGTAATG TCGGAAAAAA CGGCAAGCCA
AATTCTCCGG TGGGGTTAGG TAAATTGTTA CCGTTAGGTG TATTGATTGG TGCTGTGATT
TGGGGATTAA GCGGGTTTTA TACCATAAAA GAAGCGGAGC GTGGTGTAGT TCTTCGTTTT
GGACAATTAC ATTCAATCGT TCAGCCGGGC TTAAATTGGA AACCAACGTT TATTGATAGC
GTAACAGCGG TGAATGTTGA GCGGGTTCGT GAGTTAAGAA CACAGGGTTC AATGTTAACG
CAAGATGAAA ATATGGTTAA GGTTGAGATG ACGGTGCAAT ATCGTGTTCA AGATCCGGCG
AAATATTTGT TTAGTGTAAC GAGAGCGGAT GACAGTTTAA ATCAAGCGAC AGATAGTGCA
TTACGTTATG TAATTGGTCA TATGACGATG GATGATATTT TAACTACCGG ACGTTCAGTT
GTACGTGAAA ATACTTGGAA AACTTTAAAT GATATCATTG CTGTTTATGA TATGGGCTTA
GAAGTGATTG ATGTGAACTT CCAGTCTGCT CGCCCTCCGG AGGAAGTGAA AGCGGCTTTC
GATGATGCAA TTAAGGCTCA AGAAGATGAG CAACGCTATA TTCGTGAGGC AGAAGCTTAT
GCTCGTGAGC AAGAGCCACG GGCTCGTGGA AATGCACAAC GTATTATTGA GCAGGCGACG
GCATATAAAG AACAAGTTGT GTTGGATGCA CAAGGTGAAG TAGAGCGTTT CCAACGTTTA
TTACCTGAGT TTAAAGCATC GCCGGAATTA TTACGTGAAC GTTTGTATAT TCAAACTATG
GAAAAAGTCA TGGCGAATAC ACCGAAAGTC ATGTTAGATA CACAGAGTGG AAATAATTTA
ACCGTATTGC CGTTAGAGCA GATCTTGAAT AGTAAAACGT TAGCAGAGAA AAGCAATACG
CTCGTTAAAA CTGATCAATC AAGTGAAAAA AAGGTTCCGG AAAGAGCGGT AACAAATCCG
GAAATTTCGC AACCGAACAG TCTTTATCAA GTTATAGAAG GTCGTCAAGG GAGATTTAAT
TAA
 
Protein sequence
MENEMSFNNS DQDPWGKPGS TGKKPENNQS HNEDKQSNWE QPNNQQKNTQ QSPPDIEEIF 
NNLLKKISGK SGNVGKNGKP NSPVGLGKLL PLGVLIGAVI WGLSGFYTIK EAERGVVLRF
GQLHSIVQPG LNWKPTFIDS VTAVNVERVR ELRTQGSMLT QDENMVKVEM TVQYRVQDPA
KYLFSVTRAD DSLNQATDSA LRYVIGHMTM DDILTTGRSV VRENTWKTLN DIIAVYDMGL
EVIDVNFQSA RPPEEVKAAF DDAIKAQEDE QRYIREAEAY AREQEPRARG NAQRIIEQAT
AYKEQVVLDA QGEVERFQRL LPEFKASPEL LRERLYIQTM EKVMANTPKV MLDTQSGNNL
TVLPLEQILN SKTLAEKSNT LVKTDQSSEK KVPERAVTNP EISQPNSLYQ VIEGRQGRFN