| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0475 |
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| Symbol | metC |
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| ID | 4239957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 506509 |
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| End bp | 507699 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638104023 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_718686 |
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| Protein GI | 113460620 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.715777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA CAACTTCTTT TACCACATCA ACAATTCATG CAGGGCGTAA TAAACGAGTA
TGTAAAAATG CGGTAAACCC TGTTATTCAG CGTGCATCTT CATTGGTTTT TGATACTTTA
GCAGATAAAA AACAAGCAAC TATCAATCGA GCAAAAGGTG GATTATTTTA TGGACGTCGA
GGAACATTGA CACATTTTGC TTTGCAAGAA TTAATGTGTG AATTGGAAGG TGGTGAGGGT
TGCTATCTCT ATCCTTGCGG TGCGGCGGCG GTAAGTAATG CTATTTTAGC TTTTGTAAAA
ACCGGTGATC ATGTGTTAAT GAGCGGTGCT GCTTATGAAC CAACGCAAGA ATTTTGTCAT
ATAATTTTAA AGAAAATGTC AATTACAACC ACATTTTATG ATCCTTTAAT TGGTGAAAAA
ATTGCGGATT TAGTTCAACC AAATACGACA GTCTTGTTTT TGGAAGCACC AAGTTCACTT
ACTATGGAGA TGCCGGACAT TGTATCGATT GTGCAAGCTG CTCGCCAAAT CAATCCTAAA
ATAGTAGTTA TGATCGATAA TACTTGGAGT GCAGGTGTAT TTTTTAAGGC TTTGGATTTC
GGTGTTGATA TTTCAATTCA GGCAGGGACA AAATATCTCA TTGGGCATTC TGATGCGATG
ATTGGTACAG CGGTGGCTAA TGCACGTTGT TGGGAACAAT TACGTGAAAA TTCTTATTTA
ATGGGGCAGA TGGTCGATGC TGATACCGCC TACATGACAG CCCGTGGTAT TCGTACTCTA
CTAGTTCGCT TAAAACAGCA TCAAGAAAAT GGAATTAAAG TAGCTAAATG GTTACTGGAA
CAGCCTGAAG TAAAAACTGT TTATCATCCG GCATTACCAA GTTGTCCGGG GCATCAATAT
TTTAAGCGAT ATTTTACAGG TTTCAGCGGA TTATTTTCTT TTGAACTAAA TAAAAAACTT
TCTCAACAGG CGTTAGAAAA TTTTATGGAT CATTTTAAGA TTTTTACTAT GGCATATTCG
TGGGGGGGAT TTGAATCGCT GATTTTATGC ACTCAACCGG AAGAAATCGC TAGGATTAGA
CCTAATATTG AACGCAAATT AACCGGTACA TTAATTCGCC TACATATTGG TTTAGAGGAC
GTTGATGACC TTATTGCCGA TCTTAAAGCC GGATTTGAGC GTTTGAAATA A
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| Protein sequence | MSNTTSFTTS TIHAGRNKRV CKNAVNPVIQ RASSLVFDTL ADKKQATINR AKGGLFYGRR
GTLTHFALQE LMCELEGGEG CYLYPCGAAA VSNAILAFVK TGDHVLMSGA AYEPTQEFCH
IILKKMSITT TFYDPLIGEK IADLVQPNTT VLFLEAPSSL TMEMPDIVSI VQAARQINPK
IVVMIDNTWS AGVFFKALDF GVDISIQAGT KYLIGHSDAM IGTAVANARC WEQLRENSYL
MGQMVDADTA YMTARGIRTL LVRLKQHQEN GIKVAKWLLE QPEVKTVYHP ALPSCPGHQY
FKRYFTGFSG LFSFELNKKL SQQALENFMD HFKIFTMAYS WGGFESLILC TQPEEIARIR
PNIERKLTGT LIRLHIGLED VDDLIADLKA GFERLK
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