Gene HS_0473 details

Gene Information

• Locus tag: HS_0473
• Symbol: smpB
• ID: 4239955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 504384
• End bp: 504866
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638104021
• Product: SsrA-binding protein
• Protein accession: YP_718684
• Protein GI: 113460618
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAGA AAAAAGCAAA GGTAGCATCT AATACGATTG CCTTAAATAA ACGAGCAAGA 
CACGATTATT TTATTGAAGA TGAAATCGAA GCCGGTCTTT CTTTGCAAGG CTGGGAAGTT 
AAATCGATGC GTGCAGGTAA GGCGAGTATT GGCGATAGTT ATATTATTTT TAAGCATGGT 
GAGGCATATT TATTTGGTGC AACCATTCAG CCGTTAAGTG TTGCTTCAAC GCATATTGTT 
TGCGATCCCA CAAGAACACG TAAACTTTTA TTAAACCAGA AAGAGTTGGC TTCATTATTT 
GGTAAAGCAA ATCGAGATGG TTTCACTATT GTTGCACTTT CATTATATTG GAAAGGTCCT 
TGGGCAAAGG TGAAAATAGG TTTAGCAAAA GGGAAAAAAT TACATGATAA GCGTGAAGAT 
ATTAAAGATC GTGAATGGAA AGTAACGAAA GATCGCATTA TGAAAAATGC ACAGCGAGGT 
TAA 

 

Protein sequence

MTKKKAKVAS NTIALNKRAR HDYFIEDEIE AGLSLQGWEV KSMRAGKASI GDSYIIFKHG 
EAYLFGATIQ PLSVASTHIV CDPTRTRKLL LNQKELASLF GKANRDGFTI VALSLYWKGP 
WAKVKIGLAK GKKLHDKRED IKDREWKVTK DRIMKNAQRG