| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0449 |
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| Symbol | tbpA |
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| ID | 4239926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 475187 |
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| End bp | 478165 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638103992 |
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| Product | transferrin-binding protein A |
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| Protein accession | YP_718659 |
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| Protein GI | 113460594 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01776] TonB-dependent lactoferrin and transferrin receptors
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0459359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAATC GCTCGGCTCT GTTGAGAAAG CATGACCCAT CCATCTTTTA CTCACACGGA
ATGAAAAAAA TGTCTACAAA ACCTTTGTTT AAACTTAAGC CAATAACATT GGCTATCAGC
ACGATTTTTT TACCTTTTAC TGAGGCGGTT GCCGATACTG AATCACCGAG TAGCAATACA
GAAGCAGTGC TGGAGTTAGA AGCTATCCAG GTGCAAGCCA AACACGAGAT CAGCAGACAT
GACAATGAAG TCACCGGTTT GGGTAAGGTG GTCAAAAGCA GTGAAGACAT TGATAAAGAA
CTGATTTTGA ATATTCGCGA TTTGACCCGT TATGATCCCG GTATTTCGGT GGTGGAGCAG
GGACGTGGTG CAACGTCAGG CTATGCAATG CGTGGTGTTG ACAGAAACCG CGTGGCTATG
TTGGTGGACG GCTTGGGACA GGCGCAGTCC TATTCTACCT TGAAATCCGA TGCAAACGGC
GGGGCGATTA ATGAAATTGA ATATGAGAAT ATTAAGTCAA TTGAATTGAG CAAGGGGTCC
AGTTCGGCAG AATACGGTAG CGGTGCCTTG GGCGGTGCGG TAGGGTTTCG TACCAAAGAA
GCTGATGATG TGATTAAAGA GGGGCAAAAC TGGGGCTTGG ACAGTAAAAC GGCTTACAGC
AGCAAAAACA GCCAGTTTAT CCAATCCGTT GCCGGTGCGT TCCGTGTCGG CGGTTTTGAC
AGTTTGGCGA TTTTTACTCA TCGTAAAGGT AAGGAAACCC GCGTGCATCC TGCCGCCGAA
GAAATACAAC ATACTTACCA ACCATTGGAA GGGTATTTTA ATCGGTATGA GGTTGACCAA
AACAGCAACG GAACGCCTGT TCGGGCGAAT GCGTATTATA TACTTGCCGA TGAATGTTCT
AATTTAAGTG ATCCGAGTTG TCGTCATGCC AAGGCCAAGA CGAATAGGGT GGGTGCCCCG
GAGAACAATC CTAATTGGAC GCCCGAAGAG CAGGCACAGG CTGCTAAAAT GCCGTATCCG
ACACGTACCG CCTCTGCCAA AGATTATACG GGTCCTGACC GCATCAGCCC TAATCCGATG
GACTACCAAA GTCACTCTTT CTTCTGGAAA GGTGGTTACC GCTTGTCGCC TAACCATTAT
GTCGGCGGGG TGTTGGAACA TACGAAGCAG CGTTACGATA TCCGTGATAT GACGCAACGG
GCGTATTACA CGAAAGAGGA TATCTGCCAC AGCGGATCCA GTTGCCAAAC GTTGGATAAA
AATGAGACGG ACAAAGGTAA TTTCGGTATC ACGTTGACTG ATAATCCTTT GGACGGTTTG
GTATATGATG CCGGCAATCA AGCTCGTGGC GTGCGGTACG GACGGGGTAA ATTTTTTGAT
GAACGCCATA CGAAAAATCG CTCGGGTATT TTTTACCGCT ATGAGAATCC CGATAAAAAT
TCTTGGGCAG ATAGCTTGAC CTTGAGTATT GACCGCCAAG ATCTCAAACT GTCGAGCCGT
ATCCATTGGA CGTATTGCAC CGATTATCCT CATGTGGCAC GTTGCCGTGC CAGCTTGGAC
AAACCTTGGT CTAATTACCG TACCGAGAAA AACGATTATC AAGAACGACT CAATCTGGGA
CAATTCAATT GGGAAAAAAC TTTTAATCTG GGCTTTACCA CGCATAAGGT GAATATCGCC
GCCGGCTTTG GTACACATCG CTCCACCTTA CAACATGGCG ACTTATATGC TGAATATGTC
ACCTTGCCGC CGTATGAGGA AATAAAAGCG TATGATGATA AAGGTGCCTT TAAAACAGAT
ACGACCCCTG AGGATAAATT ACAATACGGC AATGGTTCTT ATGACAAACC TCGCGTATAT
AGACGTAAAA ACACGCCGGA ATTAAAAACT GTCAATGGGT GCAATGAGAC AGCAGGCGAT
AACCGTGACT GCTCGCCACG TGTGATTACG GGCAGACAGT ATTACCTTGC CTTGCGTAAC
CATATTGCCT TTGGTGAATG GGCAGACTTG GGGTTGGGCG TGCGGTACGA CAACCATACC
TTCCGCTCGA ATGACCCGTG GACCAAAGGT GGCAACTACC ACAACTGGTC GTGGAATGCG
GGCGTGAGCC TCAAACCAAC CCGCCACTTT GTCGTGTCTT ACCGTGTGTC CAGCGGTTTC
CGTGTCCCCG CTTTTTATGA GCTGTACGGC GTGCGTACGG GGGCTTCTGG TAAAGACAAT
CCACTCACAC AAAAAGAGTT CTTGAGCCGT AAACCGTTGA AAAGCGAAAA AGCCTTTAAC
CAAGAAATTG GTTTGGCCGT TCAGGGCGAT TTTGGTGTGA TAGAGACCAG TTTCTTCCAA
AACAACTATA AAAACCTGCT TGCCCGTGCA GATAAACATG TCGAGGGATT GGGTTATGTA
ACCGATTTTT ACAACACCCA AGATGTCAAA CTCAACGGTA TCAATATCTT GGGTAGAATC
TACTGGGAAG GCATCAGCGA TAGGCTGCCT GAAGGCTTGT ATTCCACACT TGCTTACAAC
CGTATCAATA TCAAAGCACG CAAATTGCAC GACAATTTTA CCAATGTGTC TGAGCCGACA
TTGGAAGCCG TGCAACCGGG ACGCATTATT GCAAGTATCG GCTATGATGA CCCTGAGGGC
AGATGGGGCC TTAATTTAAG CGGCACCTAC TCTCAAGCCA AACAACGTGA CGAAGTGGTC
GGCGAAAAAG TGTTCGGCAA GGGTGGCAGC ATTAAACGGA CGATCAACAG CAAACGCACT
CGCGCTTGGT ATATTTATGA TTTGACGGCA TACTACACTT GGAAAGAAAA ATTCACGTTG
AGAGCCGGTA TCTATAATTT AACCAATCGT AAATATAGTA CATGGGAAAG TGTGCGTCAG
TCCGCTGCCA ATGCGGTCAA TCAAGACCTA GGTACACGTT CAGCACGTTT TGCCGCACCG
GGCAGAAACT TTACCGTGAG TATGGAAATG AAGTTTTAA
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| Protein sequence | MANRSALLRK HDPSIFYSHG MKKMSTKPLF KLKPITLAIS TIFLPFTEAV ADTESPSSNT
EAVLELEAIQ VQAKHEISRH DNEVTGLGKV VKSSEDIDKE LILNIRDLTR YDPGISVVEQ
GRGATSGYAM RGVDRNRVAM LVDGLGQAQS YSTLKSDANG GAINEIEYEN IKSIELSKGS
SSAEYGSGAL GGAVGFRTKE ADDVIKEGQN WGLDSKTAYS SKNSQFIQSV AGAFRVGGFD
SLAIFTHRKG KETRVHPAAE EIQHTYQPLE GYFNRYEVDQ NSNGTPVRAN AYYILADECS
NLSDPSCRHA KAKTNRVGAP ENNPNWTPEE QAQAAKMPYP TRTASAKDYT GPDRISPNPM
DYQSHSFFWK GGYRLSPNHY VGGVLEHTKQ RYDIRDMTQR AYYTKEDICH SGSSCQTLDK
NETDKGNFGI TLTDNPLDGL VYDAGNQARG VRYGRGKFFD ERHTKNRSGI FYRYENPDKN
SWADSLTLSI DRQDLKLSSR IHWTYCTDYP HVARCRASLD KPWSNYRTEK NDYQERLNLG
QFNWEKTFNL GFTTHKVNIA AGFGTHRSTL QHGDLYAEYV TLPPYEEIKA YDDKGAFKTD
TTPEDKLQYG NGSYDKPRVY RRKNTPELKT VNGCNETAGD NRDCSPRVIT GRQYYLALRN
HIAFGEWADL GLGVRYDNHT FRSNDPWTKG GNYHNWSWNA GVSLKPTRHF VVSYRVSSGF
RVPAFYELYG VRTGASGKDN PLTQKEFLSR KPLKSEKAFN QEIGLAVQGD FGVIETSFFQ
NNYKNLLARA DKHVEGLGYV TDFYNTQDVK LNGINILGRI YWEGISDRLP EGLYSTLAYN
RINIKARKLH DNFTNVSEPT LEAVQPGRII ASIGYDDPEG RWGLNLSGTY SQAKQRDEVV
GEKVFGKGGS IKRTINSKRT RAWYIYDLTA YYTWKEKFTL RAGIYNLTNR KYSTWESVRQ
SAANAVNQDL GTRSARFAAP GRNFTVSMEM KF
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