Gene HS_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0424 
Symbol 
ID4239900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp452512 
End bp453636 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content33% 
IMG OID638103967 
Productphage integrase 
Protein accessionYP_718634 
Protein GI113460570 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.743387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCAT ATAGAGATGA AAACAAAAAT GGTACTTGGT ATTGTAAGCT CAGCTATGTT 
AATTGGAAAG GGCAAAAGTT AAGTAAGAAA AAACGTGGTT TTTCAACTAA GAAAGAAGCT
GTTGCTTGGG AAAAAGAGTT TTTAAACGGA CAAGCAGGAA GCATAGAATT AACATTTAGA
GAGTTCTTTG AATTATATAA AAGGGATAAA AAACCACGCA TTAGAGAAAA TACATGGAGA
ACAAAAGAAG CTATCGTTAA TTCAAAAATC ATGCCATATA TTGGGGACTT GCTGATGATT
GATATTACTA ATGTAACAAT TATTCAGTGG CAAAACGAAC TGATGAAAGT CAAAGATGAT
AGAGGTAGAA ATTATTCTCC TACTTATCTT CGTTCAATAC ATGCACAGTT AAGTAGCATC
TTAAATCATG CTTGTAGATA CTATAATCTT AAAACTAATG TTGCCAGAGA TGTAGGAACA
ATGGGAGAAA AAGAAGCTGA TGAAATGTCA TTTTGGACAC AGGAAGAATA TGAAAAGTTT
ATAGCTGCGA TTAAAGACAA ACCTCAATCA TTCTATGCTT TTGAAATTTT ATATTGGTGT
GGACTTAGAA TGGGAGAGCT ATTGGCACTT ACAAAAGAAA AATTTAACTT CAATACCAAC
ACTCTAAAAG TAGACGAATC ACTTCAAAAA ATTGATGGTG AAAATATAAT TACTCCACCT
AAAACAAAGA AGAGTATTAG AAAGATAGTA ATGCCTGATT TCTTGGCTGA GGAAATTCAG
AATTACTTAG ATGGCTTTTA TAAGTTGAAA CCAAAAGATT TGATATTTAC TTTTTCGAAA
AGCTATCTAC ATCATGAAAT GGATAGAGGA GCGAAGAAAG CTAATGTTAA AAGAATTAGA
GTTCATGATC TAAGGCATTC GCATGTATCG TTACTAATTG AGCTTGGATT TTCTGCAACT
GCAATTGCAG ATAGAGTAGG GCATGAATCA ATAGATATTA CCTATAGGTA TGCTCATTTA
TTTCCAAGCA AGCAAAATGA AATGGCAGAT ACACTATCAC AAATGAGAAG TTCAAAGCAA
AATGATTGGG ATAGTTTGCT CAAGGAGGAT AAAAATGATA TTTAG
 
Protein sequence
MGAYRDENKN GTWYCKLSYV NWKGQKLSKK KRGFSTKKEA VAWEKEFLNG QAGSIELTFR 
EFFELYKRDK KPRIRENTWR TKEAIVNSKI MPYIGDLLMI DITNVTIIQW QNELMKVKDD
RGRNYSPTYL RSIHAQLSSI LNHACRYYNL KTNVARDVGT MGEKEADEMS FWTQEEYEKF
IAAIKDKPQS FYAFEILYWC GLRMGELLAL TKEKFNFNTN TLKVDESLQK IDGENIITPP
KTKKSIRKIV MPDFLAEEIQ NYLDGFYKLK PKDLIFTFSK SYLHHEMDRG AKKANVKRIR
VHDLRHSHVS LLIELGFSAT AIADRVGHES IDITYRYAHL FPSKQNEMAD TLSQMRSSKQ
NDWDSLLKED KNDI