| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0419 |
|---|
| Symbol | birA |
|---|
| ID | 4239895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 447166 |
|---|
| End bp | 448098 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638103962 |
|---|
| Product | biotin--protein ligase |
|---|
| Protein accession | YP_718629 |
|---|
| Protein GI | 113460565 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGT TGTTATCTAT TTTAGCTAGA TGCAAACCCT ATTCTTACAA AAATTTAACC
GCACTTTTAG ACCTGACAAG AGTACAACTG GAAAAGCAGA TAGCACAATT AAGACAACAA
GGAATTTGTA TTGTTGATAA TGAGCAAAAT ATTTCTTTAA AACCGCAACT TCCTTTATTA
AATCTCTCTT ATTTGGAAAC AGAATTAAGT CCTTATAAGA TTTATTATCA CCCTATTATC
AATTCAACTA ATCAGTATCT CATGGAAAAC ATTTTACAGT TGAACAAAGG GGACTTGTGT
TTTACCGAAT ATCAATTTGC AGGGCGAGGT AGACGAGGAA GGGAATGGCA ATCGCCTTTT
GCCGGTCAAC TAATGGTGAG TTTTTATTGG ACATTCAATC CGACAGTTTC GTTAAACGGT
TTAAGTTCAG TATTAGGACT GGCAACTGCT GAAGTGCTAA ATGAAATGGG TGCGGAGGTT
AAGTTAAAAT GGCCGAATGA TCTGCTATTG TTCGGACGGA AATTAGCAGG AATTTTAGTT
GAAATCGTCA ATGCTAAAAA TGGATTACTT AATTTTATCG TTGGCATTGG GATAAATTTA
TCTTTACCGC AAGAAAACAA AATTGATCAA CCTTGGGCGG AATTATTGGA AACTTTACCG
GAAATAGATC GTAATGATCT TGCAATTCAA TTAGTAAAAA AATGGTATCA ATATTTGACT
ATTTTTGAGC AACAGGGAAT GCATGCTTTT TTTCAGCGTT GGATTAAGTT GGATTATTTT
TTTGGACAAG AAGTAAATAT TATTAGCGAA AAAGAAATCG TTTGTGGAAT TGAGCAAGGT
ATTGATGAAG AGGGTTATCT ATTAGTAGCG TTGAATAATG GAGTGTTGAG AAAATTTAAC
GGAGGAGAAG TTTCGCTGAG AAAAAAAGAG TAA
|
|---|
| Protein sequence | MIKLLSILAR CKPYSYKNLT ALLDLTRVQL EKQIAQLRQQ GICIVDNEQN ISLKPQLPLL
NLSYLETELS PYKIYYHPII NSTNQYLMEN ILQLNKGDLC FTEYQFAGRG RRGREWQSPF
AGQLMVSFYW TFNPTVSLNG LSSVLGLATA EVLNEMGAEV KLKWPNDLLL FGRKLAGILV
EIVNAKNGLL NFIVGIGINL SLPQENKIDQ PWAELLETLP EIDRNDLAIQ LVKKWYQYLT
IFEQQGMHAF FQRWIKLDYF FGQEVNIISE KEIVCGIEQG IDEEGYLLVA LNNGVLRKFN
GGEVSLRKKE
|
|---|
| |