| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0405 |
|---|
| Symbol | hisS |
|---|
| ID | 4239881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 430426 |
|---|
| End bp | 431703 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638103948 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_718615 |
|---|
| Protein GI | 113460551 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAA CAATTCAAGC AATTCGAGGT ATGAACGATT GTTCACCTAC TGAAAGTCTC
TTGTGGCAGT GGGTAGAAGA AAAAGTGCGG TCGGTTTTAC AAACTTATGG TTATTCTGAA
GTTCGAATGC CTATCGTAGA AAGTACCCCT TTATTTGCTC GTGCTATTGG TGAAGTAACA
GATGTTGTAT CAAAGGAAAT GTACACATTT TGGGATAACG ATGAACAATT AACTTTACGA
CCAGAAGGTA CTGCCGGATG CGTGCGTGCG GCAATTGAGC ATGGCTGGAT TTATAATAAT
GAACAACGTC TTTGGTATAT GGGACCTATG TTTCGTCATG AGCGTCCGCA AAAAGGACGT
TATCGTCAAT TCCATCAAGC CGGTGTAGAA GTGTTTGGTA TAGCGAATCC AGAAATTGAT
GCTGAATTGA TTTTATTAAC TGCTCGTTTA TGGAAACAAC TGGGTATTTT TGATCATGTA
ACGTTACAAC TTAATTCTAT TGGTTCTCTT GAGTCTCGAC AAAATTACCG TTCTGCATTA
GTGGAATTTT TACAGCAACA TACGGATCTA TTAAGTGAGG AAGAAAAAGA ACGTTTAGTG
AAAAATCCAC TACGTATTTT AGATACGAAG AATCAGGTGC TACAAGAAGT ATTAAATGAT
GCACCGAAAT TATTGGATTA TTTAGATCAA GAGAGTCGAG AACATTTTAG TCAACTATGC
GATTTATTAG ATGCCGTCGG TATTCAATAT GAAATCAATC CTAAATTGGT TCGAGGTTTA
GATTACTACA ATAAAACGGT GTTTGAATGG GTAACTTCCG CTTTGGGGGC ACAGGGTACA
GTCTGTGGAG GCGGTCGTTA TGACGGTTTA GTCGAACAAC TTGGCGGTCA TGCAACTTGT
AGTGTGGGTT TTGCTATGGG ATTGGAACGC TTGGTTTTAC TGGTGCAAGA AGTGAATAAG
CAAATCGTTT TACCAAGTGC GGTAGATATT TATGTGGTTT ATTTTGGTGA AAAAACGACT
TTACCTGCAT TCCAGTTAGC TGAAAAAATT CGTACGGAAT TACCGCATTT ACGCACAATG
ACACATTGTG GTGGCGGTAA CTTTAAGAAA CAATTTAAAC GTGCGGATAA AGTTGGTGCA
AAATTTGCTC TAGTGATTGG CGAAACCGAG GTGAAAACAC AGCAGGTTGT CGTAAAAGAT
TTACTGGGTG GTGCCGAGCA ATTGAGCTTG GCATTAACAG ATGTAGTTAT TTACTTAAAA
CAAGCAATTA CTCAATAA
|
|---|
| Protein sequence | MAKTIQAIRG MNDCSPTESL LWQWVEEKVR SVLQTYGYSE VRMPIVESTP LFARAIGEVT
DVVSKEMYTF WDNDEQLTLR PEGTAGCVRA AIEHGWIYNN EQRLWYMGPM FRHERPQKGR
YRQFHQAGVE VFGIANPEID AELILLTARL WKQLGIFDHV TLQLNSIGSL ESRQNYRSAL
VEFLQQHTDL LSEEEKERLV KNPLRILDTK NQVLQEVLND APKLLDYLDQ ESREHFSQLC
DLLDAVGIQY EINPKLVRGL DYYNKTVFEW VTSALGAQGT VCGGGRYDGL VEQLGGHATC
SVGFAMGLER LVLLVQEVNK QIVLPSAVDI YVVYFGEKTT LPAFQLAEKI RTELPHLRTM
THCGGGNFKK QFKRADKVGA KFALVIGETE VKTQQVVVKD LLGGAEQLSL ALTDVVIYLK
QAITQ
|
|---|
| |