| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0394 |
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| Symbol | ccmB |
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| ID | 4239870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 420349 |
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| End bp | 421014 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638103937 |
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| Product | heme ABC transporter, permease (heme exporter protein B) |
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| Protein accession | YP_718604 |
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| Protein GI | 113460540 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTTTG TACAAATTAT CAAAAGAGAG TTAAAAATTG CTTGTCGAAA GCAAGCTGAG
ATCTTAAATC CTTTATGGTT TTTTTTGATT ATTTTAACCT TGTTTCCTTT GGTTATTGGT
CCGGATCCTA AGCTATTAGC TAAAATAGCC CCTGGAATAG CTTGGGTTGC CGCTTTGCTA
TCGGCATTAC TTTCATTTGA GCGTTTATTT CGTGATGATT TTGTGGACGG TTCTCTTGAG
CAATTGATGT TGACAGCACA ACCTTTAGCG ATGACCGCCT TGGCAAAAGT CATTGCACAT
TGGCTTTTAA CTGGGTTACC GTTAATTTTA CTTTCGCCCA TTGCCGGACT ATTACTTTCA
TTGGAGTTGC ATATTTGGTG GGCATTAGTT TTAACATTGT TGTTAGGAAC GCCAACCTTG
AGTTGTTTGG GAGCCATTGG TGTGGCACTT ACGGTAGGGT TGCGTAAGGG GGGCGTTTTG
CTGAGTTTAT TAGTCTTACC TCTATTTATA CCGGTATTAA TTTTTTCTGC CGCTGTTTTA
GATGCTGCAA CATTAAATTT ATCTTATAAC GGGCAACTCG CAATTCTGGG AGCTATTTTT
GTTTCAGTGG CAACACTTTC ACCTTTCGCC ATTTCAATTG CGTTAAGAGT GAGCTTAGAC
CAGTAA
|
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| Protein sequence | MIFVQIIKRE LKIACRKQAE ILNPLWFFLI ILTLFPLVIG PDPKLLAKIA PGIAWVAALL
SALLSFERLF RDDFVDGSLE QLMLTAQPLA MTALAKVIAH WLLTGLPLIL LSPIAGLLLS
LELHIWWALV LTLLLGTPTL SCLGAIGVAL TVGLRKGGVL LSLLVLPLFI PVLIFSAAVL
DAATLNLSYN GQLAILGAIF VSVATLSPFA ISIALRVSLD Q
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