Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0393 |
Symbol | ccmA |
ID | 4239869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 419699 |
End bp | 420352 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638103936 |
Product | cytochrome c biogenesis protein CcmA |
Protein accession | YP_718603 |
Protein GI | 113460539 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATA ATCATCTACA ACTGGAACAA CTTGCCTGTC AGCGTGGCGA TAAGATTTTG TTTACTGACT TAAATTTAGA TGCTAAGTCG GGAGATTTTG TGCAAATTGA AGGACACAAT GGCATAGGAA AAACCAGTCT TTTACGAATT ATTGTGGGAC TTAGTTTCCC TGCTAAAGGT AAAGTGCGAT GGAATAAGAT CGAAATTAAT AAAAATCGTG AAGAATACCA GCACAATTTA CTCTATTTGG GGCATCTTGC TGGAATTAAG CCTGAATTAA GTGCTTGGGA AAATTTACAG TTCTATCAAA AAATTGGTAA TTGTCGACAA AGCGAGGAGT TACTTTGGGA TATTCTACAG AAAGTGGGGT TATTGGGTCG AGAAGATTTA CCTGCAGGTC AACTTTCTGC AGGACAACAA AAACGTATTG CATTAGCAAG ATTGTGGTTA TCAAATGCGG CATTGTGGAT TTTAGATGAG CCTTTTACAG CTATTGATAA ACAAGGTGTC AACGTTTTAA CTCAGTTGTT TGAACAACAT GTGGAAAATG GCGGTATTGT GATTTTAACT AGTCATCAAG AGATTCCGAG CAATAAGTTG CAAAAAGTGC GGTTAGATCA ATACAAGTTT TTTGATCAAG GGAATATGGC ATGA
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Protein sequence | MQNNHLQLEQ LACQRGDKIL FTDLNLDAKS GDFVQIEGHN GIGKTSLLRI IVGLSFPAKG KVRWNKIEIN KNREEYQHNL LYLGHLAGIK PELSAWENLQ FYQKIGNCRQ SEELLWDILQ KVGLLGREDL PAGQLSAGQQ KRIALARLWL SNAALWILDE PFTAIDKQGV NVLTQLFEQH VENGGIVILT SHQEIPSNKL QKVRLDQYKF FDQGNMA
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