Gene HS_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0392 
SymbolleuA 
ID4239868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp417549 
End bp419102 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content39% 
IMG OID638103935 
Product2-isopropylmalate synthase 
Protein accessionYP_718602 
Protein GI113460538 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA ACATTATTAT TTTTGATACA ACATTGCGTG ATGGTGAACA GGCATTAAAA 
GCCAGTTTAA CAGTAAAAGA AAAATTACAA ATTGCATTGG CGTTGGAACG TTTAGGTGTT
GATGTAATGG AAGTGGGGTT TCCAGTATCA TCAGCAGGGG ATTTTGAATC CGTTCAAACC
ATTGCTCGTC ATATAAAAAA CAGTCGTGTT TGTGCCTTAT CCCGTGCAAT GGATAAAGAC
ATTGATATTG CGGCTGACGC ATTAAAAGTA GCTGAAGCGT TCCGTATTCA TACGTTTATC
GCCACTTCCG CTTTGCATGT CGAAGCTAAA TTACGCCGCA CTTTTGATGA TGTCGTGGAA
ATGGCAATAC AAGCAGTAAA ACGTGCCAGA CGTTATACCG ATGATGTGGA ATTTTCCTGC
GAAGATGCCG GTCGAACAGG TGTTGACAAC ATTTGTCGTA TCGTTGAGGC GGCGATTAAA
GCGGGTGCAA CAACAGTCAA TATTCCAGAT ACTGTAGGTT TTTGTTTACC CACCGAATAC
GGTAATATCA TCAATCAAGT GATGAACAGA GTACCGAATA TCGATAAAGC AGTAATTTCG
GTGCATTGCC ATAATGATTT AGGCATGGCG ACTGCAAATT CGTTGACCGC AGTACAAAAC
GGTGCAAGAC AAATTGAATG TACCATTAAT GGCATTGGGG AGCGTGCAGG AAATACTGCA
TTGGAAGAAG TAGTTATGGC AATTAAAACA CGTCAAGATA TATTTAAGGG CTTAGATACA
CGAATTAATA CACAAGAAAT TCATCGTGTC AGTCAGATGG TTAGCCAGTT GTGTAATATG
CCAATTCAGC CGAATAAAGC TATTGTCGGA TCAAATGCTT TTGCACATTC TTCAGGTATT
CATCAAGACG GTATGGTTAA AAATAAAAAT ACTTACGAAA TTATGTCGCC GGAAACCATC
GGATTGAAAA AAGAAAAATT GAATTTAACC GCTCGTTCAG GACGTGCAGC AGTAAAAAGC
CATATGGACG CAATGGGTTA TCAACAAAAC GATTATGATT TGGATAAATT ATACGCCGCA
TTTTTAAAAT TAGCCGATAA AAAAGGGCAA GTATTTGATT ATGATTTGGA AGCATTGGCA
TTTATTGATA TGCAACAGGG TGATGAAGAT CGGCTAAGTT TGGATGTTAT TACTTCTCAA
ACAATCAGTA ATTTACCGGC TTCTGCCTTT GTGCAAGTTG AGCTGGACGG TAAAAAAATT
AGCCAAGTTT CAAATGGGGG AAATGGTCCC GTTGATGCCG TTTATAACGC TATTTTAGCA
ATTACAGATA TGGATATAAC TATGTTGCAT TATAACCTGA CTGCAAAAGG TGAGGGAGCA
GAAGCCTTAG GACAAGTGGA TATTGTTGTC GAACATAAAG GGCGACGTTT TCATGGTGTC
GGATTGGCAA CGGATATTGT AGAATCTTCG GCTCGTGCCT TAATTCATGC AATCAATGCC
ATTTATCGTG CCAATAAAGT GGCAGATTTA AAATCGCATA AAATTTCACA GTAA
 
Protein sequence
MQNNIIIFDT TLRDGEQALK ASLTVKEKLQ IALALERLGV DVMEVGFPVS SAGDFESVQT 
IARHIKNSRV CALSRAMDKD IDIAADALKV AEAFRIHTFI ATSALHVEAK LRRTFDDVVE
MAIQAVKRAR RYTDDVEFSC EDAGRTGVDN ICRIVEAAIK AGATTVNIPD TVGFCLPTEY
GNIINQVMNR VPNIDKAVIS VHCHNDLGMA TANSLTAVQN GARQIECTIN GIGERAGNTA
LEEVVMAIKT RQDIFKGLDT RINTQEIHRV SQMVSQLCNM PIQPNKAIVG SNAFAHSSGI
HQDGMVKNKN TYEIMSPETI GLKKEKLNLT ARSGRAAVKS HMDAMGYQQN DYDLDKLYAA
FLKLADKKGQ VFDYDLEALA FIDMQQGDED RLSLDVITSQ TISNLPASAF VQVELDGKKI
SQVSNGGNGP VDAVYNAILA ITDMDITMLH YNLTAKGEGA EALGQVDIVV EHKGRRFHGV
GLATDIVESS ARALIHAINA IYRANKVADL KSHKISQ