| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0360 |
|---|
| Symbol | ddl |
|---|
| ID | 4239836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 367865 |
|---|
| End bp | 368791 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638103903 |
|---|
| Product | D-alanine--D-alanine ligase |
|---|
| Protein accession | YP_718570 |
|---|
| Protein GI | 113460506 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC CATTAAAACA ACAAAAGATC GCTGTCTTAT TAGGGGGGAC TTCAGCTGAA
CGTGAAGTGT CGTTAAACTC AGGAAATGCG GTCTTAACAG CGTTACGTAA TCAGGGTTTT
GATGCTCACC CAATCGATCC AAAAGAATAT CCGGTTGCTA TGTTGAAAGA ACAGGGCTTT
GATCGAGTTT TCAATATTTT ACATGGGCGT GGCGGTGAAG ATGGTACGAT ACAAGGATTA
TTAGAGCAAA TAGGCTTACC CTATACGGGT TGTGGCGTGA TGGCATCTGC TTTAACAATG
GATAAAATGC GGACTAAAAT GTTGTGGAAA GCATTCGGGT TACCTGTTGC AGATATGGAA
GTCGTTACTC GCACTAGTTT TTCGCAGTTA AATCCGCAAG TAGTTGTAGA AAAATTGGGC
TTGCCTTTAA TGGTTAAACC TTCTTTGGAA GGTTCAAGTG TCGGATTGAC AAAAGTTAAC
GCTATTGATG ATCTAAAAAG TGCGGTGGAA TTTGCACTTC AATATGATGA AACCGTACTG
ATTGAAGAAT GGCTTTCCGG TGATGAATTA ACGGTTCCGA TATTAGGTAA CGAAGTTTTA
CCTTCGATTA AAATTGTACC CCAAGGGGAA TTTTATGATT ATGAAGCAAA ATATATTGCC
GATAATACGC AGTATTTTTG CCCCTCAGGA TTAACGGAAG AGCGTGAACA AGAGCTTCGT
CAATTAGTCA AACAAGCTTA TGATGTTGTG GGTTGCAGGG GATGGAGCCG TATTGATGTC
ATGCTGGACG GCGAGGGTAA ATTCCGCTTA GTGGAAGTCA ATACAAATCC GGGAATGACA
AGTCATAGCT TATTTCCAAA ATCAGCTGCA ACTGTTGGTT ATTCTTTCGA GCAATTGGTC
GTCAAAATTT TGGAGCTAAG TCTTTAA
|
|---|
| Protein sequence | MAKPLKQQKI AVLLGGTSAE REVSLNSGNA VLTALRNQGF DAHPIDPKEY PVAMLKEQGF
DRVFNILHGR GGEDGTIQGL LEQIGLPYTG CGVMASALTM DKMRTKMLWK AFGLPVADME
VVTRTSFSQL NPQVVVEKLG LPLMVKPSLE GSSVGLTKVN AIDDLKSAVE FALQYDETVL
IEEWLSGDEL TVPILGNEVL PSIKIVPQGE FYDYEAKYIA DNTQYFCPSG LTEEREQELR
QLVKQAYDVV GCRGWSRIDV MLDGEGKFRL VEVNTNPGMT SHSLFPKSAA TVGYSFEQLV
VKILELSL
|
|---|
| |