| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0326 |
|---|
| Symbol | yfeC |
|---|
| ID | 4239799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 323390 |
|---|
| End bp | 324280 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638103866 |
|---|
| Product | chelated iron ABC transporter, permease |
|---|
| Protein accession | YP_718534 |
|---|
| Protein GI | 113460472 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0155604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAGC TATTACTTGA ACCGTTTTCT TATGATTTTA TGTTTAAGGC GATTGTGGTC
AGTGGTGCCA TTGGAGCGGT TTGTGCTTTT CTTTCCGCTT ATTTAATGCT GAAAGGTTGG
TCACTGATCG GTGATGCGTT ATCCCACGCC GTTGTCCCAG GCGTTGCTAT TGCCTATGCC
TTGGCATTAC CTTATGCCGT CGGGGCTTTT TTCTCTGGGC TACTTGCCAC CATTGCCATT
TTAGCAGTGA AATACGTGAC TAAACTCAAA GAGGATGCAG TAATCGGTTT TATTTTCACC
TCTTTCTTCG CTCTCGGATT GTTGATTATT TCAATTAATC CCACTTCCGT GAACGTACAA
TCTATCGTTT TGGGCAATAT TTTAGGTATT GCCGATGAAG ATATGATCCA AGTCGCTATT
ATTCTCGGTA TATCATTTGT ATTGTTGCTA CTCTTTTGGA AAGACCTAAT GCTTGTGTTC
TTTGATGAAA TTCAAGCCAA AGCGGTAGGG CTATCACCTT TAAAATTCAA AATTTTATTC
TTTACCTTGT TAAGTGCATG CATTGTAACC GCCTTACAAG GAGTAGGGGC TATTTTGGTA
ATTGCGATGG TGATTACACC TGGAGCAACA GCATATTTGC TCACCGATCG CTTCGATCGC
CTGTTGATTA TTTCGATTTT ACTCGGTGGT ACTACTAGCT CACTAGGAGC ATATTTGAGT
TATTTCGCAG ACAGTGCAAC TGGTGGCTTT ATTGTATCAT TGCAAACGTT CATCTTCTTG
CTTGCTTTCT TTTTTGCTCC CAAATATGGT CTTATTCCAC GTAAGCGAAG TACACAAAAA
GCAGTGACTT CCTCACCAAA TCTTGCAAAT CAGGAGAAGC CAAATGTTTA A
|
|---|
| Protein sequence | MLELLLEPFS YDFMFKAIVV SGAIGAVCAF LSAYLMLKGW SLIGDALSHA VVPGVAIAYA
LALPYAVGAF FSGLLATIAI LAVKYVTKLK EDAVIGFIFT SFFALGLLII SINPTSVNVQ
SIVLGNILGI ADEDMIQVAI ILGISFVLLL LFWKDLMLVF FDEIQAKAVG LSPLKFKILF
FTLLSACIVT ALQGVGAILV IAMVITPGAT AYLLTDRFDR LLIISILLGG TTSSLGAYLS
YFADSATGGF IVSLQTFIFL LAFFFAPKYG LIPRKRSTQK AVTSSPNLAN QEKPNV
|
|---|
| |