Gene HS_0316 details

Gene Information

• Locus tag: HS_0316
• Symbol: lipB
• ID: 4239789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 314750
• End bp: 315406
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638103856
• Product: lipoate-protein ligase B
• Protein accession: YP_718524
• Protein GI: 113460462
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.152256
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATA CTACTCTTAT TATACGCCAA CTTGGAATCC AAGATTATCA ACAAGTTTGG 
CAACAAATGC GAGAATTTAC TGATACTCGA AATGCGCTAA CACCTGATGA AATTTGGTTA 
GTTCAACATC CGGCTGTTTT TACACAAGGA CAAGCAGGTA AACCTGAACA TTTGCTCAAT 
CCAACCGATA TTCCTGTAGT ACAATCCGAT CGTGGGGGAC AAATTACCTA TCATGGCTTA 
GGACAACAAA TTATGTATGT ACTGATTGAT ATTAAGCGTC ACAAAGCAAA CGGCAGTGAA 
CTTAATGTTC GTCAATTAGT TACCGCTCTT GAGCAATCAG TGGTTAGCAC ACTGGCTGAT 
TATGGTATTA AAAGTTATCC GAAAGCTGAT GCCCCCGGTG TATATGTAAA TGAACAAAAA 
ATTTGTTCTC TTGGTTTACG TATTCGTAAA GGCTGCTCTT TCCATGGTTT AGCCTTAAAT 
ATCAACATGG ATTTATCGCC ATTTAGACAA ATCAATCCTT GTGGCTATAT AGGCTTAGAA 
ATGTGCCAAA TGGCAGATTT TATACCCACT GAACAAGCTC AATGTGATAA AGTTGCACCC 
AAATTAGTTA CACACTTTAC GCAATTATTG GGCTATAATG ATGTAACAAC TTATTAA 

 

Protein sequence

MTDTTLIIRQ LGIQDYQQVW QQMREFTDTR NALTPDEIWL VQHPAVFTQG QAGKPEHLLN 
PTDIPVVQSD RGGQITYHGL GQQIMYVLID IKRHKANGSE LNVRQLVTAL EQSVVSTLAD 
YGIKSYPKAD APGVYVNEQK ICSLGLRIRK GCSFHGLALN INMDLSPFRQ INPCGYIGLE 
MCQMADFIPT EQAQCDKVAP KLVTHFTQLL GYNDVTTY