| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0313 |
|---|
| Symbol | |
|---|
| ID | 4239786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 312490 |
|---|
| End bp | 313248 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638103853 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_718521 |
|---|
| Protein GI | 113460459 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.526725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA AAAAATTCCT ACTTATCGCC TTGCTCTCTT TCGGTATTGC CCAATCTGCA
CTTGCCGAAA CCAATAGCGA AAAATTTGAT CGTGCTTACC AATTTATTGA ACAACAAAAT
TATTCTGCCG CTTTTCCCTT ATTCAAACAA CTGGCTGAAC AGGGATTGGC AAATGCTCAA
TACAATCTCG GCGTGATGTA TAAAAAAGGA CGAGGTGTTG CCCAAAGCGA TACACAAGCC
GTCTATTGGT GGAAAAAAGC TGCCGAACAG GGATTGGCAG ATGCTCAATA CAATCTCGGC
TTGATGTATA AAAAAGGACG AGGTGTTGCC CAAAGCGATA CACAAGCCAT CTATTGGTAC
ACAAAAGCCG CTGAACAAGG CATTGCAGAA GCACAAAGCA AGCTCGGCGG GATGTATGCA
AAAGGACGAG GTGTTACACA AAACTATCAA CAAGCTGTCT ATTGGTTCAC AAAAGCTGCC
GAACAGGGAG ATGCAAAAGT ACAACTCCTT CTCGGCTTGA TGTATGAAAA CGGCCGAAGT
GTTACACAAA ACTATCAACA AGCCGTCTAT TGGTACACAA AAGCCGCTGA ACAAGGCATT
GCAGAAGCAC AACTCTATCT CGGCGTGATG TATGAATTCG GACGAGGGGT GCAAAAAAAT
GTTTCTACAG CTAAAGAATT CTACGGTAAA GCATGCGATA ACGGCAACGC TCAGGGATGT
AAAGATTTCG CCAGATTAGA TCGGAAAGGG GGGCGTTAA
|
|---|
| Protein sequence | MKLKKFLLIA LLSFGIAQSA LAETNSEKFD RAYQFIEQQN YSAAFPLFKQ LAEQGLANAQ
YNLGVMYKKG RGVAQSDTQA VYWWKKAAEQ GLADAQYNLG LMYKKGRGVA QSDTQAIYWY
TKAAEQGIAE AQSKLGGMYA KGRGVTQNYQ QAVYWFTKAA EQGDAKVQLL LGLMYENGRS
VTQNYQQAVY WYTKAAEQGI AEAQLYLGVM YEFGRGVQKN VSTAKEFYGK ACDNGNAQGC
KDFARLDRKG GR
|
|---|
| |