Gene HS_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0298 
SymbolgntR 
ID4239500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp296341 
End bp297342 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content38% 
IMG OID638103838 
Productgluconate utilization operon repressor 
Protein accessionYP_718506 
Protein GI113460444 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.306519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGATA AACGTAAACG CCCCACTTTG CAAGATATTG CCTCTCATCT TGGTATTACT 
AAAATGACGA TAAGTCGTTA TTTGCGTGAT CCACGTCTTG TCGCACCGAA AACAGGTGTG
CGTATTGCCG AAGCTATAGA ACACTTCGGA TATATTCCTA ATCGTGCACC GGAAATTTTA
TCCAATGCGA AAAGCAAAGC AATTGGTGTA CTTGTACCCT CTTTAACAAA TCATGTTTTT
GCCGATGTAA TTAAAGGTAT TGAGAATATT ACCGATCAAG CAGGTTATCA AACCATGTTA
GCCCATTATG GTTATTGTCA AGAAAAAGAA GAAAAACGAA TTGAATCGCT TCTCTCTTAT
AACATTGATG GACTTATTTT GTCGGAAACA GAACATTCGG CAAGAACGCT AAAAATGTTA
GATGTGGCAA ATATTCCCGT TGTCGAAATT ATGGATACCA GCGAATTCGG TTTACAACAA
GTGGTGGGGT TCAACAATAT AGCGGCAGCA CAGTCTATGG TGGAAACAAT GATTAAACGA
GGCTATAAAA ATATTGTCTA TTTCTCTGCT CGTATGGATA AACGTACCCG TTTAAAAATG
CAGGGTTACG AACAAGCAAT GAAAAAACAT CAACTGACAC CTCATAGTCT CCTCACGGAA
GAACCCTCAT CATTTACTTT AGGTGCGGAA CAATTAAAAC TGGCATTAAA AAAACATCCC
CAAATTGATG GCATTTTTTG TACCAATGAT GATTTAGCAA TTGGTGCGTT ATTTGAATGT
CAACGTCAAG GAATTGACGT ACCTAAAGAA ATCGGTATTG CAGGCTTCCA TGGGTTAAAT
GTTGGATTAT CTTTAACGAC ACAAATTGCC ACAGTACGCA CACCACGCTT AAATATCGGT
GAAGTGGCAG CAAAAGAATT ACTGAATCGT ATAGAAGGTA TTGTACCTGA AAATTACATG
ATCAATCTCG GATATAATAT TCATTTAGGT GAAAGTATTT AA
 
Protein sequence
MPDKRKRPTL QDIASHLGIT KMTISRYLRD PRLVAPKTGV RIAEAIEHFG YIPNRAPEIL 
SNAKSKAIGV LVPSLTNHVF ADVIKGIENI TDQAGYQTML AHYGYCQEKE EKRIESLLSY
NIDGLILSET EHSARTLKML DVANIPVVEI MDTSEFGLQQ VVGFNNIAAA QSMVETMIKR
GYKNIVYFSA RMDKRTRLKM QGYEQAMKKH QLTPHSLLTE EPSSFTLGAE QLKLALKKHP
QIDGIFCTND DLAIGALFEC QRQGIDVPKE IGIAGFHGLN VGLSLTTQIA TVRTPRLNIG
EVAAKELLNR IEGIVPENYM INLGYNIHLG ESI