Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0297 |
Symbol | |
ID | 4239499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 295486 |
End bp | 296304 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638103837 |
Product | hydrolase |
Protein accession | YP_718505 |
Protein GI | 113460443 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00178815 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAATA CTAATTATTA TTTAAAAATG GAAGAACATT TTCTTTACGT CCCCTACTAT AACCGCACTC GTCGTATTCG AGTGTTATTG CCAAAAGATT ATTACACCGA TACGTGGGAT AGTTATGCAG TACTCTATAT GCATGACGGA CAAAATATTT TTTATAGTAA AGAATCTTAC TCAGGTTACT CTTGGAAAAT TATTCCAACC ATTAAACACC ATAAAGAATT TCCTAAAATT ATTATTGTTG GCATAGATAA TTCAGGTGTA GATCGCCTTG ATGAATATGG ACCTTGGCGT ACTGACGTAG GCTCGTCACC GGAAATTAAA AAGTGCGGTG GGAAAGGTAT GGAATACGGC AAATGGGTAG TTGAGATCGT TAAACCATTC ATTGATCAAC ATTACCGCAC TAAACCACAA AAAGAACATA CTTTGCTTGC TGGTAGTTCC ATGGGAGGAA TTATCACTGC CTATATGGGG TCAGCATATC CACAAATTTT TGGACATTTA GGTGTTTTTT CTCTCGCGTC TTGGTTTAGT GAAAAAGATT TTCTGCATTT TATCCACCAC AATCCAATTG ATAAAAATAG TAAAGTCTTT ATTCAAGTAG GCACTAAAGA AGGAGATGAT GTTGATTCAT TATTTATTTC AAATATGAAC CAAGCCTATA TTGATTGCAC ACTCCATTAT TACCAAGCCT TATTACGCAC AGGTCATCCA TTAGATAACA TTCGCTTACG AATGATGGCA AATGAAATTC ATCATGAAAA ACACTGGGCA GATCATTTTG TGGAATTTTT GCATTTTTCA TTATTGTAA
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Protein sequence | MKNTNYYLKM EEHFLYVPYY NRTRRIRVLL PKDYYTDTWD SYAVLYMHDG QNIFYSKESY SGYSWKIIPT IKHHKEFPKI IIVGIDNSGV DRLDEYGPWR TDVGSSPEIK KCGGKGMEYG KWVVEIVKPF IDQHYRTKPQ KEHTLLAGSS MGGIITAYMG SAYPQIFGHL GVFSLASWFS EKDFLHFIHH NPIDKNSKVF IQVGTKEGDD VDSLFISNMN QAYIDCTLHY YQALLRTGHP LDNIRLRMMA NEIHHEKHWA DHFVEFLHFS LL
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