| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0292 |
|---|
| Symbol | |
|---|
| ID | 4239494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 292198 |
|---|
| End bp | 293244 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638103832 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_718500 |
|---|
| Protein GI | 113460438 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000491136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAATA AAATGAGCGA AAAACAAACA ACAATTTTAA TAATTAATAT GGCATCAGAT
TTTGGTGGTG GCGAAATTCA AACTGAAGAA TTAATGTTAA ATTTAACGAA TTATAATATT
TGTTTTTTTG GAAAATCTTC AGGGAAATTT ATTCCTAGAT TAAAAGAAAA AGCACCTCAT
ATTAAAATTG TAAATTTATG GGAAATGCTG AAATTAGTTT TTTGTTGCTC TAGTTTAATT
ATTCATGCTC AAGATGGAAG GGGAGCTCAT ATTGCTGGTT TTTTAAAAAA AATTTCTGGA
AGACCTGTAG TGATTACTCG TCATGTTAGT TTTCCATTTA AACGTAAATT TTCATTATCT
TCATACAAAA ATGCAGATAT GCTAGTTGGA GTGAGTCAAC AAGTAACAGA AAATTTAAAA
CTTTTGAATT CAAATTGTAG AACAATTTAT GGTTGCATTA AACCACTTTT AGAAAATGCT
GAATTTGAGC AAAGATATTT CGTAAAAAAA CATATCTTAG CTATTGCCCA TATTGGTAAT
TTGCAGGCAG TGAAAAATTT TCAACTGACT TTATCTTTGG CGAAAAACTT TAGTCAAATT
CAGTTTTTTA TTGTTGGCTC TGGAGAGTTG GAGCAGGAAT TAAAACAGCA GGCGATAAAC
TTGCCTAATA TTACTTTTAT TCCTTTTACT CCCTATATTG GCAGTGTTTT CAAGAAAGTA
GACTTACAAA TAGTACCCTC TCATTCAGAA GGTTTGGGGG CTGTCATTCT AGAAGGCTAT
CAATACCGAG TATCCGTTAT AGCACACCAA ACTGGGGGTA TTTCTGAAAT TGTACAAAAC
GAGAAAACAG GTTTTTTAGT AGAAAATAAT GATCCCATGA TTTATCATAA AATTTTAACC
ACACTTTTGG ATAATCCGCA AAAATTGTGT GAACTTAAAC AAAATGTTGA AAGGTATATT
TTTGAGCATG ATTTCTCAGC CAGAAGGATG GCTCTAGAAT ATGAGCAAGT TTATAGTGCA
ATTTTAGCCA ATAGAACTCA GAAATAA
|
|---|
| Protein sequence | MRNKMSEKQT TILIINMASD FGGGEIQTEE LMLNLTNYNI CFFGKSSGKF IPRLKEKAPH
IKIVNLWEML KLVFCCSSLI IHAQDGRGAH IAGFLKKISG RPVVITRHVS FPFKRKFSLS
SYKNADMLVG VSQQVTENLK LLNSNCRTIY GCIKPLLENA EFEQRYFVKK HILAIAHIGN
LQAVKNFQLT LSLAKNFSQI QFFIVGSGEL EQELKQQAIN LPNITFIPFT PYIGSVFKKV
DLQIVPSHSE GLGAVILEGY QYRVSVIAHQ TGGISEIVQN EKTGFLVENN DPMIYHKILT
TLLDNPQKLC ELKQNVERYI FEHDFSARRM ALEYEQVYSA ILANRTQK
|
|---|
| |