Gene HS_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0290 
Symbol 
ID4239492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp290717 
End bp291352 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content35% 
IMG OID638103830 
Producthypothetical protein 
Protein accessionYP_718498 
Protein GI113460436 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.725518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTAATGAGCT TCCTCAAACT CCTTGGGCTG CCAAATCTTT GTGGGAAATA 
GAAACAAAAT CGCTATTGGT ATTATGTTTT TCACTTTCCT TGCTCGGTAT TGGTGATGGA 
TTGTTGGTTT TATCCAATTT AGGCTCTGCA CCTTGGACAG TTTTGTCTCA AGGCATTGCT 
TTACAAGCAC AATTTAGTGT TGGCTGGGCA TCATTTATAG TAAGTATCTT AGTAATGTTA 
ATGTGGATTC CGTTAAGGTT AAAAGTTGGT TTTGGAACAA TTCTGAATGT TGTTCTGATC 
GCATTATTTC TTGGTTTAAG TACATTTTAT ATTTCTCCGC CGAGTTCCCT TTTAGCAAGG 
TTTTGCTATC TTATAATGGG TATTATTTTT TTTGGTATCG GAACCGCATT TTATTTGACT 
TGTCATCAAG GGGCAGGACC TCGAGATGGA TTAATGGTTG GGTTATGTTA TCGCTTTAAA 
TTAAGAATAG GAATAGTCCG TACTCTTATG GAAGTTTCTG TTTGTTTTTT GGGTTTTTTG 
CTAGGCGGAA CAGTAGGAAT TGGTACACTA TTATTTGCTA CCAGTATTGG TTGGATTATT 
CAATTAGGGG TTTATTTTAT TATGAAAATA AAATGA
 
Protein sequence
MKKFNELPQT PWAAKSLWEI ETKSLLVLCF SLSLLGIGDG LLVLSNLGSA PWTVLSQGIA 
LQAQFSVGWA SFIVSILVML MWIPLRLKVG FGTILNVVLI ALFLGLSTFY ISPPSSLLAR 
FCYLIMGIIF FGIGTAFYLT CHQGAGPRDG LMVGLCYRFK LRIGIVRTLM EVSVCFLGFL 
LGGTVGIGTL LFATSIGWII QLGVYFIMKI K