Gene HS_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0268 
SymbolrecC 
ID4239469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp263931 
End bp267365 
Gene Length3435 bp 
Protein Length1144 aa 
Translation table11 
GC content34% 
IMG OID638103808 
ProductDNA helicase/exodeoxyribonuclease V, gamma subunit 
Protein accessionYP_718476 
Protein GI113460414 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTACTT TGTATTATTC CAATCAATTG GAAACGCAAA AAGATATTTT GTTACATTTA 
ATGGATCAAC AGCCATTATC AGATCCTTTC CAAAAAGAAG TTATTTTAGT ACAAAGTGGC
GGTATGGCAC AGTGGATACA GTGGCAGATT GCAGAGAAAA AAGGTATATC GGCAAATTTG
TCTTTTCCTA TGCCTGCAAG TTTTATTTGG CAATTATATG TTGATAATTT ACCGCAAGTC
ACAGCTTCTT CTCAATTTAG TAAAGAAAAT ATGACTTGGC GATTAATGGA AATTATTCCG
CATTATATAG ATCAACCGGA ATTTTACATA TTGCGTCAAT ATTTACAGCA AAGTTACCAA
TCAAGTCAGC AGCGATACTA CCAATTAGCC AGCAAAATAG CAGAGTTATT TGACCAATAT
TTAGTTTATC GACCGGAATG GATTATAAGT TGGGAGCAGA ATAAAGGCGT AGAAATTATT
CAGCAAATTC AGTATTACCA AAAAAATTTA TTTGTCTCAG AATCATGTTT TTCTCAAGTT
GAGCAACATA TTGTTTGGCA AGGTATTTTA TGGAGAGCTT TAGTATGCTC TGTGCCAAAA
GAAACACAAA AGAATGTTTT ACATCGTGCA CATTTACATT TACTTTTCTT AAAACATATT
GCCGGCGAAA AACCTAAAAA TTTGCCTACG AGAATTTTTG TATTTGGTAT TTCAGCTTTA
CCGAAGGTGC ATTTAGATAC TTTAAGTGCA TTAAGCCAGC ATTGCGATGT GCATTTATTT
TTTAATAATG CTTGTCGTGA ATATTGGGGA GATATAATTG ATCAGAGCCA TTGGCAACGT
TTGAAAGTGC GAGAGCGTAT AAGTTGGCAA GATTTCCAAC AACCACAAAA TACACAGGCT
TGGTTATCCG ATGAGCAAAT ACATACTTTT GAACAAAATG TATTTGAACA AATTTATGAT
GAAAAGTTAC AGGTTGGCAA TCCTTTGCTT TCCTCATGGG GAAAATTAGG ACGGGATTAT
TTGTATTTAC TCACTGAACT GGAGGCTAAT GAAATCAATG CTTATGTCGA ACTTTCGGAA
AAAACGTTGT TGTCGCAAGT ACAGGCACTC ATTTTAGATT TGGTTCCTTC GAAGCACAAG
TTTTTAAATT TGGCAGAAAA TGACCGCTCT TTAACTTTTC ATTCTTGTTA TAGTCCAATA
CGAGAGGTTC AAGCTCTACA AGATTATTTG TTACATCTAT TTAACCAAGC TCAGGATTTG
ACACCTAAAG ATGTGGTAGT TATGGTTGCA GACATTGATA AATATGCACC ATATATTCAG
GCGGTATTCA GTCAAGGCGA ACACTATATT CCGTACTCTA TCGCAGACAG CAAACTTTCC
GAAAATGACC CTTTAGTATC TGCTTTTTTA CAATTGTTAA ATTTAAAAGA AAGTTTATTC
AGTGCGGAGG AAGTGCTGAC TTTTTTGGAT CATCCTGTTA TTCGTCAGAG TTTTAATATT
ACTTTAGAGG ATTTGGCACA AATTCGTCAT TGGGTTGAGC ATTCGGGTAT TCGATTCGGA
TTAGAAAAAT ATCCGCAACA ATCCTTGCAA AATTATAACG CTTGGCAGGC AGGTTTGGAG
AGAATGTTAC TGGGATTTGC TATGCGGGAA GAACATGGTC TATGGTTAGA TACGCTTGGC
TTTGATGATA CCTATGGATT AAAAGGGCAG CTTGTCGGTT ATTTAAAGGA TTTTATTACT
CGTTTGTATC AATGGCATCA ATTTTTGCAA GCAGATCACG TTATTGAAAA GTGGGAAGAA
CATTTAATTG AATTAGTGTC ATCTTTTTTT GTGGTAGACG GAATGGATAT TCCGCAGCAA
TACAAAACAA CTTTTAATTA TCTTATTGAC ACTATTCAAC AATTAACGGA GTTGATCCTA
GATAGCTCTT TTCAGCAAGA AATAAGTGCG GAGGTTATTT ACGAAGTTTT TGTTGAACGC
TTAAAAGATA TACCTAATAG CCTAAAATTT TTAATGGGGA AAGTCACTTT TTGTACGCTT
CTCCCCATGC GATCAATCCC TTTTAAAGTG GTGTGTTTAC TTGGTATGAA TGATGGTGAT
TATCCACGTC AACAAACGCC GAACAGCTTT GATTTAATGC AATATCATCG TAAAAAAGGC
GATCGTTTTC GCCGAGATGA TGATCGCTAT TTATTTTTAG AAGCATTGAT CTCGGCACAA
CAGTATTTTT ATGTGAGTTA TATTGGTCGC TCTATTATTG ATGATAGTGA ACGAGAACCT
TCAGTTCTTG TTACGCAATT GTTGGATTAT ATAGCTGAAA ATATCAATGC TCAAGGTGAT
CTAAAAGGGC AAGATATTCT GAAAAAATCA CTTATTCAAC AACATGCGAT GACTGCATTT
AGCCGAGAAA ATTTCACCAA AAGAGACCGC TCTTTTTTTA AGCAATGGCT AGTGTTGGCA
AATAAAAAAG ATAGTGGCAA TTTGGCGAAT TTTTTACAGC CGATAAATGA TACAGAGATA
GTTAAAGAAA TTTCATTAAA TGATTTAATT GCGTTTATTC AGGATCCTGT TCGGTATTTT
TTTGAGCAAA AATTACGTGT TTTTTTACGT AAGACAGAAC AAAATATTGC GGATACTGAA
AATTTTACTT TAGATAATTT AGAGTTATAT CAAATAAAAG AAGAACTTAT TTATCTTTCT
GAGCAGGAAT GGGAAGACTT TTTTGCTAGG ATGAAAATTA AGGGAATTAT GCCGCAAGGG
GCGTTTGCAA AAATTTATCA GCAAAAAACA AAAAATGAGA TCATTACACT TAAATCTTTA
GTTACGCCTT ATTTGGATCA AATATCGGAA CAAATTCCTG TTGACTTGAG CGTTGAAACA
GAATATGGAA AAGTGTGCTT AACGGGGAGC ATTGACAGTT TATATCATCA AAAAATGCGA
AGAGTAACGT GGAGAGCCTC TGCTGTCAAA ACGAAAGATA TTATCCAAAC ATGGATTTAT
TATTTATTAC AAACCTTGGT TGGAGAGCCT AATTCGCAAG TTGAGCATTA CGCTTTAGAC
AGCAGACTTT CTTTTGAAAA AATAGAAAAA TCTACCGCAC TTCAACAGCT TCAAACTTAT
GTTGAGGCAT ATTTACTTGG ACAAGTTTCA GTGTTATTAA TGCCAATGAA AAATTTCGAT
CAATATCTTC AATTGCTTTT TACTCCGAAG AGTAATAAAT GGAAAGAGGA AAAGGATATT
GATTTATCTG CTTGTTTTGA ATTGTTATCA GAACTTGGCT CAGGTAGAAA AGAGAGAAAT
TTTTATGTGA AAACAGATCT TTATTGGCAA AGAATATTAG CACAAACAAA ACTAGACGAT
TCACATATTT TAGAAATTAA TCAACGTGTT ATACAATGGT TCGATTTAAT GTTAATGCTA
AAAAGAGTTG AATAG
 
Protein sequence
MFTLYYSNQL ETQKDILLHL MDQQPLSDPF QKEVILVQSG GMAQWIQWQI AEKKGISANL 
SFPMPASFIW QLYVDNLPQV TASSQFSKEN MTWRLMEIIP HYIDQPEFYI LRQYLQQSYQ
SSQQRYYQLA SKIAELFDQY LVYRPEWIIS WEQNKGVEII QQIQYYQKNL FVSESCFSQV
EQHIVWQGIL WRALVCSVPK ETQKNVLHRA HLHLLFLKHI AGEKPKNLPT RIFVFGISAL
PKVHLDTLSA LSQHCDVHLF FNNACREYWG DIIDQSHWQR LKVRERISWQ DFQQPQNTQA
WLSDEQIHTF EQNVFEQIYD EKLQVGNPLL SSWGKLGRDY LYLLTELEAN EINAYVELSE
KTLLSQVQAL ILDLVPSKHK FLNLAENDRS LTFHSCYSPI REVQALQDYL LHLFNQAQDL
TPKDVVVMVA DIDKYAPYIQ AVFSQGEHYI PYSIADSKLS ENDPLVSAFL QLLNLKESLF
SAEEVLTFLD HPVIRQSFNI TLEDLAQIRH WVEHSGIRFG LEKYPQQSLQ NYNAWQAGLE
RMLLGFAMRE EHGLWLDTLG FDDTYGLKGQ LVGYLKDFIT RLYQWHQFLQ ADHVIEKWEE
HLIELVSSFF VVDGMDIPQQ YKTTFNYLID TIQQLTELIL DSSFQQEISA EVIYEVFVER
LKDIPNSLKF LMGKVTFCTL LPMRSIPFKV VCLLGMNDGD YPRQQTPNSF DLMQYHRKKG
DRFRRDDDRY LFLEALISAQ QYFYVSYIGR SIIDDSEREP SVLVTQLLDY IAENINAQGD
LKGQDILKKS LIQQHAMTAF SRENFTKRDR SFFKQWLVLA NKKDSGNLAN FLQPINDTEI
VKEISLNDLI AFIQDPVRYF FEQKLRVFLR KTEQNIADTE NFTLDNLELY QIKEELIYLS
EQEWEDFFAR MKIKGIMPQG AFAKIYQQKT KNEIITLKSL VTPYLDQISE QIPVDLSVET
EYGKVCLTGS IDSLYHQKMR RVTWRASAVK TKDIIQTWIY YLLQTLVGEP NSQVEHYALD
SRLSFEKIEK STALQQLQTY VEAYLLGQVS VLLMPMKNFD QYLQLLFTPK SNKWKEEKDI
DLSACFELLS ELGSGRKERN FYVKTDLYWQ RILAQTKLDD SHILEINQRV IQWFDLMLML
KRVE