| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0260 |
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| Symbol | tolR |
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| ID | 4239776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 257677 |
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| End bp | 258099 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638103797 |
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| Product | colicin uptake protein TolR |
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| Protein accession | YP_718468 |
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| Protein GI | 113460406 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00469758 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTATC GTCGAAAACG TCGAGATATT AAGTCAGAAA TTAATATTAT TCCTTTTTTG
GATGTCTTAT TGGTTTTATT GCTCATTTTT ATGGCAACAG CACCGATTAT TAGTCAGAGT
GTTCAAGTTG AACTTCCCGA AGCTGTAGAA AGCCAAAATG TATCTAAAGA AGATAAAACG
CCTGTTATTT TGGAGGTTTC AGGTATTGGA CAGTATGCAC TTTCCATTGG TGGGGAGCGA
ACTGAGGGCA TAACAGAAGA ATTAGTAACT CAACTTTCTA AACAAGAATT TGACAAAGAT
AATAATACGT TATTTTTGGT TGGAGGGGCT AAAGATGTTC CGTATGAGGA GGTAATCAAA
GCTTTGAATT TACTTCATGT TGCGGGAATA AAATCTGTTG GATTGATGAC TAATCCTCTT
TAA
|
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| Protein sequence | MSYRRKRRDI KSEINIIPFL DVLLVLLLIF MATAPIISQS VQVELPEAVE SQNVSKEDKT
PVILEVSGIG QYALSIGGER TEGITEELVT QLSKQEFDKD NNTLFLVGGA KDVPYEEVIK
ALNLLHVAGI KSVGLMTNPL
|
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