Gene HS_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0258 
Symbol 
ID4239774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp256504 
End bp256929 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content36% 
IMG OID638103795 
Productthioesterase 
Protein accessionYP_718466 
Protein GI113460404 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.024858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTT TTAAATTGCC TGTTCGTGTG TATTACGAAG ATACCGATGC CGGAGGTGTT 
GTTTATCATG CCCGTTATCT CCATTTTTTT GAACGGGCGA GAACAGAATA CTTGCGAACA 
TTGAATTTTT CTCAGCAAAA CTTATTAAAT GAGCGAAAGG TTGCTTTTGT TGTGAAGTCA 
ATACAGATTG ACTACTGTGT TCCTGCAAAA TTAGATGACT TATTAATTGT GGAAACTTAT 
GTTGTAGCTA TTAAAGGAGC AAGTATAGTT TTTTCACAAA TATTGAAACG AGATGATGAG 
ATCATTTCAC AAGCTGTGGT GAAAGTTGCG TCAGTGGATC TTGTGAAAAT GAGACCTGTG 
GCTATACCTC AAGAAATAAA AGCAGAAATT AAACTAAATG ATAACATTTT CGGAGTTATG 
TCATGA
 
Protein sequence
MPVFKLPVRV YYEDTDAGGV VYHARYLHFF ERARTEYLRT LNFSQQNLLN ERKVAFVVKS 
IQIDYCVPAK LDDLLIVETY VVAIKGASIV FSQILKRDDE IISQAVVKVA SVDLVKMRPV 
AIPQEIKAEI KLNDNIFGVM S