| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0257 |
|---|
| Symbol | cydB |
|---|
| ID | 4239773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 254994 |
|---|
| End bp | 256130 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638103794 |
|---|
| Product | cytochrome D ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_718465 |
|---|
| Protein GI | 113460403 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00328462 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATT ATGAATTTCT ACGTTTTATT TGGTGGATTT TAGTCGGGGT ACTGCTTATT
GGATTTGCAG TAACAGACGG ATTTGATATG GGAGTTCTTA GCTTATTACC TTTCGCAGGC
AAAAAAGAAG TTGAGAAACG TATAATGATC AATTCTATCG CACCACATTG GGATGGAAAC
CAAGTTTGGT TATTGACTGC AGGCGGTGCA ATGTTTGCTG CTTGGCCGAT AGTTTATGCA
GCCTCTTTCT CCGGCTTTTA TATTGCAATG ATTTTAGTTT TAGCCGCACT ATTTTTCCGT
CCTGTCGGGC TAGAGTATCG TGCTAAAATC GATAATCCAA CTTGGCGTAA ATTTTGGGAT
TGGGGATTAT TTGCTGGTGG TTTTGTCCCA TCATTGGTAT TCGGTGTTGC ATTCGGTAAT
TTATTGCAAG GTGTTCCATT TGAATTTAAT GATTTGATGC AAGTAACTTA TACAGGTTCT
TTCTTTGAAT TATTAAATCC TTTTGCGATT CTTTGTGGTT TAATCAGTTT TTCTATGTTA
ACCACACAAG GTGCTGCTTG GTTACAAATG AAAACAACAT CAGAACTGCG TGAGCGTGCT
CGTGTAATAA CACAAGTAGG TGCTTTTGTT ACATTGTTGA CGTTTATTTT GGCTGGTGTT
TGGTTATATT TCAAAGAAGG TTTTATTGTA ACAAGTGTCC TTGATCATAA TGCACCATCT
GACCCAACTG TTAAAACAGT TGCAGTTGAA GTGGGAGCTT GGTTTAAGAA TTATTTTGAT
GCACCTGTGT TGTTTATTCT TCCGGCATTA GCAGTGGGTG GTGCGTTGTT AAATATTTTG
GCATCAAAAG CCAACCGTTC AGGATTTGCA TTTTTCTTCT CGTCTATCAC GATGGCAGGA
ATTATATTAA CCTGCGGTGT TGCCATGTTC CCATTTGTTA TGCCTTCTAT TTCTCATCCG
AATATGAGTT TATTAATGTG GGATTCAACA TCAAGTGAAT TAACATTAAC ACTGATGCTT
GGTTTTGCAC TGTTCTTTGT TGTTATTTTA CTGAGCTACA CCATTTGGGC TTATGCGAAG
ATGTTTGGTC GCTTAGATGC TGACTTCATT GAAGAAAACA AAAACTCATT ATACTAG
|
|---|
| Protein sequence | MIDYEFLRFI WWILVGVLLI GFAVTDGFDM GVLSLLPFAG KKEVEKRIMI NSIAPHWDGN
QVWLLTAGGA MFAAWPIVYA ASFSGFYIAM ILVLAALFFR PVGLEYRAKI DNPTWRKFWD
WGLFAGGFVP SLVFGVAFGN LLQGVPFEFN DLMQVTYTGS FFELLNPFAI LCGLISFSML
TTQGAAWLQM KTTSELRERA RVITQVGAFV TLLTFILAGV WLYFKEGFIV TSVLDHNAPS
DPTVKTVAVE VGAWFKNYFD APVLFILPAL AVGGALLNIL ASKANRSGFA FFFSSITMAG
IILTCGVAMF PFVMPSISHP NMSLLMWDST SSELTLTLML GFALFFVVIL LSYTIWAYAK
MFGRLDADFI EENKNSLY
|
|---|
| |