Gene HS_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0252 
SymbolartI 
ID4239768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp250466 
End bp251191 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content35% 
IMG OID638103789 
Productarginine ABC transporter, substrate-binding protein 
Protein accessionYP_718460 
Protein GI113460398 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00199338 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TACTTTTAGC AACAATGTTG GCTGGTGCTA CGATTGGTGC AAATGCACAA 
GATATTACTT TTGCTATGGA ACCAAGTTAT CCACCATTTG AATTAACTAA TGAAAAAGGT
GAAATTATTG GTTTTGACGT TGATATTGCT AATGCAATTT GTAAAGAAAT TCAAGCTAAT
TGTAGCTTCA AAGCCCAAGC GTTTGATGCG TTAATTCCAA GTTTAATTAA AGGTCGCGGC
GGGTTTGATG CGGCAATTTC AGCGATTGAT ATTACGGAAG CCCGTGCAAA ACAAGTAGCA
TTTACCGATT CTTATTATGA AAGTTCTGCC AGTTTTATTG CATTAAAAGG GAAAGCGGAT
TTAACGACGG CAAAAGTGGT TGGTGTACAA AACGGTACAA CGTATCAACA ATATGTGAAT
AAAGAATCGA AGCAATATCA ATCTAAATCT TATGCTAGCT TACAAGATGC AATTTTGGAT
TTAAAAAATG GTCGTATTGA TCTCATTTTT GGTGATACGG ATGTATTAAG AGATATGTTT
GATAAAAATC CGGAATTGCA GTTTGTGGGC GAGCGTGTAA CGGATAAACG TTATTTCAAT
AACGGCTTGG GAATTGCGGT AAATAAAAAG AATACCGCAC TTGTTGAGCA ATTAAATAAA
GGTATTTCGG CAATCAAAGC AAACGGCGAA TATCAAAAAA TTTATGATAA ATGGATGACT
AAATAA
 
Protein sequence
MKKLLLATML AGATIGANAQ DITFAMEPSY PPFELTNEKG EIIGFDVDIA NAICKEIQAN 
CSFKAQAFDA LIPSLIKGRG GFDAAISAID ITEARAKQVA FTDSYYESSA SFIALKGKAD
LTTAKVVGVQ NGTTYQQYVN KESKQYQSKS YASLQDAILD LKNGRIDLIF GDTDVLRDMF
DKNPELQFVG ERVTDKRYFN NGLGIAVNKK NTALVEQLNK GISAIKANGE YQKIYDKWMT
K