| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0244 |
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| Symbol | ispB |
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| ID | 4239760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 244128 |
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| End bp | 245108 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638103781 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_718452 |
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| Protein GI | 113460390 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000222684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCCAA TGAATATCAA TGCAATCCAA TCTCTTATTA AAACAGATAT GGATAAAGTG
AATGCCACAA TTCTAGCACA ACTTAATTCG GATGTTGCTT TGATTAATCA GCTCGGTTAT
TACATTGTTC AAAGTGGTGG AAAACGTATC CGCCCTATGA TTGCTTTGTT GGCAGCCAGA
GCACTAAATT ATCAAGGTGA TGAGCCTATT ACTTGTGCTG CATTTGTTGA ATTTATTCAT
ACGGCGACAT TGTTACATGA TGATGTCGTT GATGAGTCCG ATATGCGTCG TGGAAATCCG
ACAGCCAATG CGGAATTCGG CAATGCGGCA AGTGTATTGG TAGGTGATTT TATTTATACA
CGTGCATTCC AATTGATGAC TAAACTCAAT TCATTACGTA TTTTACAAAT TATGTCCGAT
GCAACAAATA TCATTGCAGA AGGTGAAGTA CAACAATTAA TGAATGTCAA TGATCCGGAG
ACAAGTGAAG ATAATTATAT GAAAGTGATT TATAGTAAAA CCGCTCGCTT GTTTGAGGTC
GCTACACAAT GTGCCGCCAT AACAGCTCAA AGTAATGCAG AACAAGAAAT TGCTTTACAA
CACTATGGAC GATACTTAGG AACAGCATTT CAACTAGTTG ATGATGTGTT AGATTACAGT
GCAAATGCGG CGACTTTGGG TAAAAATATC GGTGATGACT TAGCTGAAGG GAAACCTACT
CTTCCTTTAT TACATGCAAT GCGTAATGGT ACACCACAAC AATCTGCATT AATTCGTGAA
GCAATCGAAC AGGGCGGAAA ACGGGATTTT TTGGATGATG TACTTGCCAT TATGACAGAG
CAAAAATCTT TGGATTATGC CATGAGTAAA GCAAAAGAAG AGGCACAAAA AGCTGTTGAT
TCAATTTCCT GTTTACCAGA AAACCAATAT AAGCAAGCAT TAATTTCTTT GGCTTATTTA
TCCGTTGAGA GGCACTATTA A
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| Protein sequence | MNPMNINAIQ SLIKTDMDKV NATILAQLNS DVALINQLGY YIVQSGGKRI RPMIALLAAR
ALNYQGDEPI TCAAFVEFIH TATLLHDDVV DESDMRRGNP TANAEFGNAA SVLVGDFIYT
RAFQLMTKLN SLRILQIMSD ATNIIAEGEV QQLMNVNDPE TSEDNYMKVI YSKTARLFEV
ATQCAAITAQ SNAEQEIALQ HYGRYLGTAF QLVDDVLDYS ANAATLGKNI GDDLAEGKPT
LPLLHAMRNG TPQQSALIRE AIEQGGKRDF LDDVLAIMTE QKSLDYAMSK AKEEAQKAVD
SISCLPENQY KQALISLAYL SVERHY
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