| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0223 |
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| Symbol | rbsD |
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| ID | 4239738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 223545 |
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| End bp | 223964 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638103759 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_718430 |
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| Protein GI | 113460369 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00424417 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA CAAAATTATT AAATGCGAGC TTATCACATC ACATTGCGAC TTTAGGCCAT
ACAGAGAGTT TGGTTATTTG TGATGCCGGA TTACCTATTT CAAATCAAGT TGAGCGTATT
GATTTAGCGT TGGAGGCAGG CGTTCCTGGT TTTTTACAAA CTGTTGATGT GGTTATAAGT
GAGATGTTTG TGGAGCATGC CGTTGTGGCG AAAGAAATTA GAGAAAAAAA TCCGCAAATT
CATGACGCAC TTTTAGATTC GTTAAGAAAA TTATCAGAAC AACAAGGCAA CTGCATTGCC
GTTGAATATG TGGAACATGA AGAATTTAAA GTATTAAGTT CTGAGAGTAA AGTCGCAGTG
TGTACAGGGG AATTCTCGCC GTATGCTAAT ATTATTTTGT ATTCGGGTGT GCCATTTTAA
|
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| Protein sequence | MKKTKLLNAS LSHHIATLGH TESLVICDAG LPISNQVERI DLALEAGVPG FLQTVDVVIS
EMFVEHAVVA KEIREKNPQI HDALLDSLRK LSEQQGNCIA VEYVEHEEFK VLSSESKVAV
CTGEFSPYAN IILYSGVPF
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