Gene HS_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0212 
Symbol 
ID4239727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp214337 
End bp215119 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID638103748 
Productamino acid ABC transporter, substrate-binding 
Protein accessionYP_718419 
Protein GI113460358 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA AAATAACATT TTTATTCACT GCTGTTTTGA CAATAGCCGC CAACACACAA 
GCCTTAGCAC AGGCGAGTTT ATTAGATCGC ATTAACAACA AAGGAACGAT TACGGTCGGT
ACGGAAGGCA CTTACGCACC GTTCACTTAC CACGACTCAA CCGGAAAATT GACAGGATAT
GATGTTGAAG TTACTCGTGC AGTAGCTAAA AAATTAGGCG TAACTGTTGA ATTTAAAGAA
ACACAATGGG ACGCAATGCT TGCCGGTTTA AAAGCTGGAC GTTTTGATCT TGTTGCAAAC
CAAGTCGCAT TAACAACACC TGAACGTCAA GCCACTTTTG ACAAATCTGA ACCTTATAGT
TGGTCCGGAG CAATGTTAGT AGCACGAGAT AATGAAACTC GCATTAAACA AGTTGAAGAT
GTAAAAGGCT TAAAAGCAGC ACAAACACTT AGCTCAAACT ATGGTGAATT GGCACAAAAA
TACCAAGCTA AGATTGTCCC GATTGACGGC ATGGCACAAG GCTTATTACT CATACAACAA
AAACGAGCAG ATATGACGTT TAACGATGCC CTCGCCTTAT TGGATTATTT GAAAAAATAC
CCAAATTCAG GTTTAAAACC GGTATGGGAA TCTAAAGATA AAGTGGGGGC GGGTCTTATT
GTCAATAAAA ATAATGATGA AGCACTAGCA AAAATCAGTG CAGCTATCGA AGAATTACGC
AACGATGGCA CATTAAAACA ATTAGGTGAA CAATTCTTTG GTAGAGATAT CAGTGTTAAA
TAA
 
Protein sequence
MLKKITFLFT AVLTIAANTQ ALAQASLLDR INNKGTITVG TEGTYAPFTY HDSTGKLTGY 
DVEVTRAVAK KLGVTVEFKE TQWDAMLAGL KAGRFDLVAN QVALTTPERQ ATFDKSEPYS
WSGAMLVARD NETRIKQVED VKGLKAAQTL SSNYGELAQK YQAKIVPIDG MAQGLLLIQQ
KRADMTFNDA LALLDYLKKY PNSGLKPVWE SKDKVGAGLI VNKNNDEALA KISAAIEELR
NDGTLKQLGE QFFGRDISVK