Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0212 |
Symbol | |
ID | 4239727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 214337 |
End bp | 215119 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638103748 |
Product | amino acid ABC transporter, substrate-binding |
Protein accession | YP_718419 |
Protein GI | 113460358 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAA AAATAACATT TTTATTCACT GCTGTTTTGA CAATAGCCGC CAACACACAA GCCTTAGCAC AGGCGAGTTT ATTAGATCGC ATTAACAACA AAGGAACGAT TACGGTCGGT ACGGAAGGCA CTTACGCACC GTTCACTTAC CACGACTCAA CCGGAAAATT GACAGGATAT GATGTTGAAG TTACTCGTGC AGTAGCTAAA AAATTAGGCG TAACTGTTGA ATTTAAAGAA ACACAATGGG ACGCAATGCT TGCCGGTTTA AAAGCTGGAC GTTTTGATCT TGTTGCAAAC CAAGTCGCAT TAACAACACC TGAACGTCAA GCCACTTTTG ACAAATCTGA ACCTTATAGT TGGTCCGGAG CAATGTTAGT AGCACGAGAT AATGAAACTC GCATTAAACA AGTTGAAGAT GTAAAAGGCT TAAAAGCAGC ACAAACACTT AGCTCAAACT ATGGTGAATT GGCACAAAAA TACCAAGCTA AGATTGTCCC GATTGACGGC ATGGCACAAG GCTTATTACT CATACAACAA AAACGAGCAG ATATGACGTT TAACGATGCC CTCGCCTTAT TGGATTATTT GAAAAAATAC CCAAATTCAG GTTTAAAACC GGTATGGGAA TCTAAAGATA AAGTGGGGGC GGGTCTTATT GTCAATAAAA ATAATGATGA AGCACTAGCA AAAATCAGTG CAGCTATCGA AGAATTACGC AACGATGGCA CATTAAAACA ATTAGGTGAA CAATTCTTTG GTAGAGATAT CAGTGTTAAA TAA
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Protein sequence | MLKKITFLFT AVLTIAANTQ ALAQASLLDR INNKGTITVG TEGTYAPFTY HDSTGKLTGY DVEVTRAVAK KLGVTVEFKE TQWDAMLAGL KAGRFDLVAN QVALTTPERQ ATFDKSEPYS WSGAMLVARD NETRIKQVED VKGLKAAQTL SSNYGELAQK YQAKIVPIDG MAQGLLLIQQ KRADMTFNDA LALLDYLKKY PNSGLKPVWE SKDKVGAGLI VNKNNDEALA KISAAIEELR NDGTLKQLGE QFFGRDISVK
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